Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SP110Q9HB58 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SP110Q9HB58 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 AC113367.3-201ENST00000508316 1912 ntBASIC15.17■□□□□ 0.02
SP110Q9HB58 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.17■□□□□ 0.02
SP110Q9HB58 AC140479.7-201ENST00000636301 2332 ntBASIC15.17■□□□□ 0.02
SP110Q9HB58 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.17■□□□□ 0.02
SP110Q9HB58 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 AL354702.1-201ENST00000442006 1960 ntBASIC15.17■□□□□ 0.02
SP110Q9HB58 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SP110Q9HB58 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.17■□□□□ 0.02
SP110Q9HB58 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 FAM21FP-201ENST00000426241 1131 ntBASIC15.17■□□□□ 0.02
SP110Q9HB58 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.17■□□□□ 0.02
SP110Q9HB58 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.17■□□□□ 0.02
SP110Q9HB58 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 AC022447.6-201ENST00000515522 438 ntBASIC15.17■□□□□ 0.02
SP110Q9HB58 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.17■□□□□ 0.02
SP110Q9HB58 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SP110Q9HB58 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SP110Q9HB58 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SP110Q9HB58 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.16■□□□□ 0.02
SP110Q9HB58 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SP110Q9HB58 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SP110Q9HB58 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.16■□□□□ 0.02
SP110Q9HB58 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SP110Q9HB58 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.16■□□□□ 0.02
SP110Q9HB58 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.16■□□□□ 0.02
SP110Q9HB58 MIR4259-201ENST00000584466 101 ntBASIC15.16■□□□□ 0.02
SP110Q9HB58 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.16■□□□□ 0.02
SP110Q9HB58 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 AC099063.4-201ENST00000641099 1602 ntBASIC15.16■□□□□ 0.02
SP110Q9HB58 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
SP110Q9HB58 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.16■□□□□ 0.02
SP110Q9HB58 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms