Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 KRT18P36-201ENST00000411618 1276 ntBASIC16.63■□□□□ 0.25
TNFRSF25Q93038 FAM58BP-201ENST00000439056 645 ntBASIC16.63■□□□□ 0.25
TNFRSF25Q93038 RPS2P32-201ENST00000439199 892 ntBASIC16.63■□□□□ 0.25
TNFRSF25Q93038 AC012441.2-201ENST00000444843 739 ntBASIC16.63■□□□□ 0.25
TNFRSF25Q93038 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 TCAM1P-207ENST00000485295 1537 ntBASIC16.63■□□□□ 0.25
TNFRSF25Q93038 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 MST1P2-201ENST00000457982 2291 ntBASIC16.63■□□□□ 0.25
TNFRSF25Q93038 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF25Q93038 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 BTBD6P1-201ENST00000412176 1267 ntBASIC16.62■□□□□ 0.25
TNFRSF25Q93038 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.62■□□□□ 0.25
TNFRSF25Q93038 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 RBM8B-201ENST00000555532 525 ntBASIC16.62■□□□□ 0.25
TNFRSF25Q93038 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 BNIP3P13-201ENST00000599968 566 ntBASIC16.62■□□□□ 0.25
TNFRSF25Q93038 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 FAM90A7P-201ENST00000382628 1395 ntBASIC16.62■□□□□ 0.25
TNFRSF25Q93038 FAM90A23P-201ENST00000400136 1395 ntBASIC16.62■□□□□ 0.25
TNFRSF25Q93038 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF25Q93038 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.61■□□□□ 0.25
TNFRSF25Q93038 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.61■□□□□ 0.25
TNFRSF25Q93038 MIR1908-201ENST00000410394 80 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms