Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.04□□□□□ -0.16
TM9SF4Q92544 AL645728.2-202ENST00000641679 227 ntBASIC14.04□□□□□ -0.16
TM9SF4Q92544 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.04□□□□□ -0.16
TM9SF4Q92544 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TM9SF4Q92544 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.03□□□□□ -0.16
TM9SF4Q92544 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 AC022616.1-201ENST00000518688 554 ntBASIC14.03□□□□□ -0.16
TM9SF4Q92544 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 AC106872.11-201ENST00000605838 421 ntBASIC14.03□□□□□ -0.16
TM9SF4Q92544 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TM9SF4Q92544 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TM9SF4Q92544 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.02□□□□□ -0.16
TM9SF4Q92544 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TM9SF4Q92544 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 LINC01230-201ENST00000625222 3017 ntBASIC14.02□□□□□ -0.16
TM9SF4Q92544 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TM9SF4Q92544 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.02□□□□□ -0.16
TM9SF4Q92544 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TM9SF4Q92544 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.02□□□□□ -0.16
TM9SF4Q92544 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
TM9SF4Q92544 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.02□□□□□ -0.16
TM9SF4Q92544 AC007787.1-201ENST00000588095 1583 ntBASIC14.02□□□□□ -0.16
TM9SF4Q92544 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TM9SF4Q92544 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TM9SF4Q92544 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.02□□□□□ -0.17
TM9SF4Q92544 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TM9SF4Q92544 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms