Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 KRT43P-201ENST00000434019 910 ntBASIC15.13■□□□□ 0.01
PTCD2Q8WV60 EIF3FP3-201ENST00000434851 1086 ntBASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 IL12A-205ENST00000480787 863 ntTSL 3 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AP003168.1-201ENST00000530091 307 ntBASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AC024267.5-201ENST00000579154 599 ntBASIC15.13■□□□□ 0.01
PTCD2Q8WV60 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AL158050.2-201ENST00000605336 568 ntBASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AC145423.3-201ENST00000615987 467 ntBASIC15.13■□□□□ 0.01
PTCD2Q8WV60 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AC099336.1-201ENST00000417053 1171 ntBASIC15.12■□□□□ 0.01
PTCD2Q8WV60 RPS3AP29-201ENST00000437728 769 ntBASIC15.12■□□□□ 0.01
PTCD2Q8WV60 RPS2P32-201ENST00000439199 892 ntBASIC15.12■□□□□ 0.01
PTCD2Q8WV60 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 KRT223P-202ENST00000449164 1292 ntBASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 CSNK1A1P3-201ENST00000504105 330 ntBASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AC023968.2-201ENST00000560593 1049 ntBASIC15.12■□□□□ 0.01
PTCD2Q8WV60 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AC093783.1-201ENST00000612976 329 ntBASIC15.12■□□□□ 0.01
PTCD2Q8WV60 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 AL138709.1-201ENST00000614840 1693 ntBASIC15.12■□□□□ 0.01
PTCD2Q8WV60 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTCD2Q8WV60 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms