RNA–Protein interactions for RNA: ENST00000437728.1

RPS3AP29-201, Transcript of ribosomal protein S3a pseudogene 29, humanhuman

BASIC

Gene RPS3AP29, Length 769 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP29-201ENST00000437728 AEBP2Q6ZN18 517 aaPredicted RBP33.87■■■■□ 3.01
RPS3AP29-201ENST00000437728 CHIC1Q5VXU3 224 aa32.78■■■□□ 2.84
RPS3AP29-201ENST00000437728 PHF23Q9BUL5 403 aaPredicted RBP28.8■■■□□ 2.2
RPS3AP29-201ENST00000437728 SENP3Q9H4L4 574 aaPredicted RBP28.79■■■□□ 2.2
RPS3AP29-201ENST00000437728 FOXD1Q16676 465 aa26.77■■□□□ 1.88
RPS3AP29-201ENST00000437728 PLPPR3Q6T4P5 718 aa26.49■■□□□ 1.83
RPS3AP29-201ENST00000437728 PPP6R1Q9UPN7 881 aa25.52■■□□□ 1.68
RPS3AP29-201ENST00000437728 ADRA2BP18089 450 aa25.5■■□□□ 1.67
RPS3AP29-201ENST00000437728 PIAS4Q8N2W9 510 aaPredicted RBP25.19■■□□□ 1.62
RPS3AP29-201ENST00000437728 MSH5O43196 834 aa24.8■■□□□ 1.56
RPS3AP29-201ENST00000437728 PPP4R3CPQ6ZMV5 832 aa23.32■■□□□ 1.32
RPS3AP29-201ENST00000437728 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
RPS3AP29-201ENST00000437728 MAPK8IP2Q13387 824 aaPredicted RBP23.24■■□□□ 1.31
RPS3AP29-201ENST00000437728 POTEDQ86YR6 584 aa23.14■■□□□ 1.29
RPS3AP29-201ENST00000437728 DMRT2Q9Y5R5 561 aa22.92■■□□□ 1.26
RPS3AP29-201ENST00000437728 CNKSR2Q8WXI2 1034 aa22.72■■□□□ 1.23
RPS3AP29-201ENST00000437728 NCBP3Q53F19 620 aaKnown RBP22.61■■□□□ 1.21
RPS3AP29-201ENST00000437728 KCNA4P22459 653 aa22.42■■□□□ 1.18
RPS3AP29-201ENST00000437728 RNF216Q9NWF9 866 aaPredicted RBP22.34■■□□□ 1.17
RPS3AP29-201ENST00000437728 HOXD11P31277 338 aaPredicted RBP22.32■■□□□ 1.16
RPS3AP29-201ENST00000437728 NPM3O75607 178 aaKnown RBP22.27■■□□□ 1.16
RPS3AP29-201ENST00000437728 DCAF8L1A6NGE4 600 aa22.04■■□□□ 1.12
RPS3AP29-201ENST00000437728 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
RPS3AP29-201ENST00000437728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.01
RPS3AP29-201ENST00000437728 SLC4A1APQ9BWU0 796 aaKnown RBP21.3■■□□□ 1
RPS3AP29-201ENST00000437728 RNF39Q9H2S5 420 aa21.21■□□□□ 0.99
RPS3AP29-201ENST00000437728 SLC4A2P04920 1241 aa21.1■□□□□ 0.97
RPS3AP29-201ENST00000437728 CACNB1Q02641 598 aaPredicted RBP20.94■□□□□ 0.94
RPS3AP29-201ENST00000437728 C1QBPQ07021 282 aaKnown RBP20.94■□□□□ 0.94
RPS3AP29-201ENST00000437728 U3KPZ7 1027 aaPredicted RBP20.91■□□□□ 0.94
RPS3AP29-201ENST00000437728 FOXD4L1Q9NU39 408 aa20.72■□□□□ 0.91
RPS3AP29-201ENST00000437728 ZBTB22O15209 634 aa20.62■□□□□ 0.89
RPS3AP29-201ENST00000437728 MYCNP04198 464 aaPredicted RBP20.59■□□□□ 0.89
RPS3AP29-201ENST00000437728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.54■□□□□ 0.88
RPS3AP29-201ENST00000437728 HNRNPUL2Q1KMD3 747 aaKnown RBP20.54■□□□□ 0.88
RPS3AP29-201ENST00000437728 SAMD1Q6SPF0 538 aaPredicted RBP20.46■□□□□ 0.87
RPS3AP29-201ENST00000437728 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
RPS3AP29-201ENST00000437728 CAPN15O75808 1086 aa20.4■□□□□ 0.86
RPS3AP29-201ENST00000437728 APLP2Q06481 763 aa20.4■□□□□ 0.86
RPS3AP29-201ENST00000437728 EHMT2Q96KQ7 1210 aa20.38■□□□□ 0.85
RPS3AP29-201ENST00000437728 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
RPS3AP29-201ENST00000437728 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
RPS3AP29-201ENST00000437728 ZNF219Q9P2Y4 722 aaPredicted RBP20.18■□□□□ 0.82
RPS3AP29-201ENST00000437728 DSG3P32926 999 aa20.09■□□□□ 0.81
RPS3AP29-201ENST00000437728 ATF5Q9Y2D1 282 aaPredicted RBP20.08■□□□□ 0.81
RPS3AP29-201ENST00000437728 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
RPS3AP29-201ENST00000437728 ABCB7O75027 752 aa19.99■□□□□ 0.79
RPS3AP29-201ENST00000437728 ATXN8OSP0DMR3 200 aa19.99■□□□□ 0.79
RPS3AP29-201ENST00000437728 POLA2Q14181 598 aa19.81■□□□□ 0.76
RPS3AP29-201ENST00000437728 ZBTB12Q9Y330 459 aaPredicted RBP19.43■□□□□ 0.7
RPS3AP29-201ENST00000437728 FBLN2P98095 1184 aa19.26■□□□□ 0.67
RPS3AP29-201ENST00000437728 MKRN4PQ13434 485 aaPredicted RBP19.17■□□□□ 0.66
RPS3AP29-201ENST00000437728 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
RPS3AP29-201ENST00000437728 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
RPS3AP29-201ENST00000437728 SPDYE2BA6NHP3 402 aa18.89■□□□□ 0.61
RPS3AP29-201ENST00000437728 SPDYE6P0CI01 402 aa18.89■□□□□ 0.61
RPS3AP29-201ENST00000437728 SPDYE2Q495Y8 402 aa18.89■□□□□ 0.61
RPS3AP29-201ENST00000437728 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
RPS3AP29-201ENST00000437728 ZNF692Q9BU19 519 aaPredicted RBP18.8■□□□□ 0.6
RPS3AP29-201ENST00000437728 SSUH2Q9Y2M2 353 aa18.69■□□□□ 0.58
RPS3AP29-201ENST00000437728 REM2Q8IYK8 340 aaPredicted RBP18.68■□□□□ 0.58
RPS3AP29-201ENST00000437728 SPDYE4A6NLX3 237 aa18.61■□□□□ 0.57
RPS3AP29-201ENST00000437728 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
RPS3AP29-201ENST00000437728 CHRDL2Q6WN34 429 aa18.49■□□□□ 0.55
RPS3AP29-201ENST00000437728 PITPNM1O00562 1244 aa18.47■□□□□ 0.55
RPS3AP29-201ENST00000437728 SPDYE1Q8NFV5 336 aaPredicted RBP18.42■□□□□ 0.54
RPS3AP29-201ENST00000437728 CLEC11AQ9Y240 323 aa18.41■□□□□ 0.54
RPS3AP29-201ENST00000437728 FKBP8Q14318 412 aa18.36■□□□□ 0.53
RPS3AP29-201ENST00000437728 POTEHQ6S545 545 aa18.27■□□□□ 0.52
RPS3AP29-201ENST00000437728 PROM2Q8N271 834 aa18.2■□□□□ 0.5
RPS3AP29-201ENST00000437728 PIP4P2Q8N4L2 257 aa18.19■□□□□ 0.5
RPS3AP29-201ENST00000437728 PRR29P0C7W0 189 aa18.17■□□□□ 0.5
RPS3AP29-201ENST00000437728 FXR2P51116 673 aaKnown RBP eCLIP18.17■□□□□ 0.5
RPS3AP29-201ENST00000437728 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
RPS3AP29-201ENST00000437728 PRKAR2AP13861 404 aaKnown RBP18.02■□□□□ 0.48
RPS3AP29-201ENST00000437728 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
RPS3AP29-201ENST00000437728 CREBZFQ9NS37 354 aa17.84■□□□□ 0.45
RPS3AP29-201ENST00000437728 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
RPS3AP29-201ENST00000437728 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
RPS3AP29-201ENST00000437728 FARP1Q9Y4F1 1045 aaPredicted RBP17.74■□□□□ 0.43
RPS3AP29-201ENST00000437728 HAX1O00165 279 aa17.72■□□□□ 0.43
RPS3AP29-201ENST00000437728 MIER1Q8N108 512 aa17.71■□□□□ 0.43
RPS3AP29-201ENST00000437728 PLCD3Q8N3E9 789 aa17.66■□□□□ 0.42
RPS3AP29-201ENST00000437728 PLEKHG5O94827 1062 aa17.64■□□□□ 0.41
RPS3AP29-201ENST00000437728 MNX1P50219 401 aaPredicted RBP17.59■□□□□ 0.41
RPS3AP29-201ENST00000437728 C19orf67A6NJJ6 358 aa17.56■□□□□ 0.4
RPS3AP29-201ENST00000437728 NPM1P06748 294 aaKnown RBP eCLIP17.55■□□□□ 0.4
RPS3AP29-201ENST00000437728 VASPP50552 380 aaPredicted RBP17.53■□□□□ 0.4
RPS3AP29-201ENST00000437728 EVX2Q03828 476 aa17.52■□□□□ 0.4
RPS3AP29-201ENST00000437728 CD44P16070 742 aaKnown RBP17.48■□□□□ 0.39
RPS3AP29-201ENST00000437728 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
RPS3AP29-201ENST00000437728 SP7Q8TDD2 431 aaPredicted RBP17.41■□□□□ 0.38
RPS3AP29-201ENST00000437728 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
RPS3AP29-201ENST00000437728 KLHL34Q8N239 644 aa17.35■□□□□ 0.37
RPS3AP29-201ENST00000437728 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
RPS3AP29-201ENST00000437728 TSPYL2Q9H2G4 693 aaPredicted RBP17.29■□□□□ 0.36
RPS3AP29-201ENST00000437728 IFNLR1Q8IU57 520 aaPredicted RBP17.27■□□□□ 0.36
RPS3AP29-201ENST00000437728 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
RPS3AP29-201ENST00000437728 NUBP1P53384 320 aa17.25■□□□□ 0.35
RPS3AP29-201ENST00000437728 ABCC9O60706 1549 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms