Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 AC234782.1-201ENST00000451950 919 ntBASIC22.67■■□□□ 1.22
VPS8Q8N3P4 RN7SL769P-201ENST00000469386 295 ntBASIC22.67■■□□□ 1.22
VPS8Q8N3P4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 AC026803.1-201ENST00000569130 274 ntBASIC22.67■■□□□ 1.22
VPS8Q8N3P4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 AC007191.1-201ENST00000623179 2995 ntBASIC22.67■■□□□ 1.22
VPS8Q8N3P4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 HSPA8P5-201ENST00000456928 2069 ntBASIC22.67■■□□□ 1.22
VPS8Q8N3P4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 CAP2P1-201ENST00000557743 1390 ntBASIC22.67■■□□□ 1.22
VPS8Q8N3P4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
VPS8Q8N3P4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 AC012044.1-201ENST00000603431 297 ntBASIC22.66■■□□□ 1.22
VPS8Q8N3P4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 LINC01815-202ENST00000641468 1409 ntBASIC22.66■■□□□ 1.22
VPS8Q8N3P4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
VPS8Q8N3P4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 AC140658.4-201ENST00000561990 352 ntBASIC22.65■■□□□ 1.22
VPS8Q8N3P4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 AC091046.1-201ENST00000331871 207 ntBASIC22.65■■□□□ 1.22
VPS8Q8N3P4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 POU5F1P2-201ENST00000521750 823 ntBASIC22.65■■□□□ 1.22
VPS8Q8N3P4 MAX-218ENST00000557746 571 ntTSL 4 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS8Q8N3P4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VPS8Q8N3P4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.22
VPS8Q8N3P4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
VPS8Q8N3P4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VPS8Q8N3P4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 TBC1D3J-201ENST00000620719 1426 ntBASIC22.64■■□□□ 1.21
VPS8Q8N3P4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC22.64■■□□□ 1.21
VPS8Q8N3P4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms