Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 MIR6869-201ENST00000619434 62 ntBASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM48Q8IWZ4 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.58□□□□□ -0.07
TRIM48Q8IWZ4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AC004945.1-201ENST00000416738 983 ntBASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AC104982.3-201ENST00000581995 514 ntBASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AL118558.3-201ENST00000607414 1079 ntBASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AL022328.3-201ENST00000607943 679 ntBASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AC002472.3-201ENST00000640124 621 ntBASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 AP000593.2-201ENST00000542775 1433 ntBASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM48Q8IWZ4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 AC011840.2-201ENST00000563063 1520 ntBASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 HIST2H2BB-201ENST00000449108 381 ntBASIC14.57□□□□□ -0.08
TRIM48Q8IWZ4 AC104306.2-201ENST00000451877 341 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms