Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 AC067750.1-201ENST00000608826 6545 ntBASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 AC134312.5-201ENST00000568031 1313 ntBASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC83Q8IWF9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CCDC83Q8IWF9 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC83Q8IWF9 BEND3P1-201ENST00000421591 1944 ntBASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 AC020910.6-201ENST00000623084 1459 ntBASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 AC012441.1-201ENST00000446669 685 ntBASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 MESTP3-201ENST00000503460 968 ntBASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 AL391280.1-201ENST00000506969 1062 ntBASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC83Q8IWF9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 AC009093.2-202ENST00000620513 2079 ntBASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 BAATP1-201ENST00000412284 1225 ntBASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 MIR5189-201ENST00000577370 114 ntBASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 AC138466.3-201ENST00000619983 221 ntBASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 FKBP4P6-201ENST00000457486 1332 ntBASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 AL138709.1-201ENST00000614840 1693 ntBASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC83Q8IWF9 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms