Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
COL23A1Q86Y22 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 CICP23-201ENST00000605013 2741 ntBASIC18.13■□□□□ 0.49
COL23A1Q86Y22 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 AP000354.1-201ENST00000396982 456 ntBASIC18.13■□□□□ 0.49
COL23A1Q86Y22 GRPEL2P1-201ENST00000453145 339 ntBASIC18.13■□□□□ 0.49
COL23A1Q86Y22 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 AC140658.4-201ENST00000561990 352 ntBASIC18.13■□□□□ 0.49
COL23A1Q86Y22 COQ4-204ENST00000608951 781 ntTSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.13■□□□□ 0.49
COL23A1Q86Y22 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 OR52M2P-201ENST00000414298 959 ntBASIC18.12■□□□□ 0.49
COL23A1Q86Y22 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 PPP1R2P4-201ENST00000424051 595 ntBASIC18.12■□□□□ 0.49
COL23A1Q86Y22 ASS1P2-201ENST00000439895 1223 ntBASIC18.12■□□□□ 0.49
COL23A1Q86Y22 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 AC092612.1-201ENST00000514501 998 ntBASIC18.12■□□□□ 0.49
COL23A1Q86Y22 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 KNOP1P1-201ENST00000542108 989 ntBASIC18.12■□□□□ 0.49
COL23A1Q86Y22 KLF17P1-201ENST00000547105 1126 ntBASIC18.12■□□□□ 0.49
COL23A1Q86Y22 AC145285.5-201ENST00000562217 361 ntBASIC18.12■□□□□ 0.49
COL23A1Q86Y22 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 AC091769.1-201ENST00000619576 568 ntBASIC18.12■□□□□ 0.49
COL23A1Q86Y22 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 AC019109.1-201ENST00000401725 1874 ntBASIC18.12■□□□□ 0.49
COL23A1Q86Y22 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.12■□□□□ 0.49
COL23A1Q86Y22 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL23A1Q86Y22 OR7E115P-201ENST00000382617 1024 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms