Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 MEIS3P1-201ENST00000495167 958 ntBASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 AC026410.3-201ENST00000514280 936 ntBASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 ZNF890P-202ENST00000530367 1156 ntBASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 AC005562.1-201ENST00000583030 3219 ntBASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
LINC00242Q5T6M2 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC00242Q5T6M2 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC00242Q5T6M2 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.79
LINC00242Q5T6M2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.15□□□□□ -0.79
LINC00242Q5T6M2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.79
LINC00242Q5T6M2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
LINC00242Q5T6M2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC015909.5-201ENST00000624336 2266 ntBASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 TLE1P1-201ENST00000422965 589 ntBASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC007969.1-201ENST00000433675 447 ntBASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 PRSS30P-206ENST00000641773 873 ntBASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AL591122.2-201ENST00000624125 1853 ntBASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms