Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 AC215219.1-201ENST00000400706 1817 ntBASIC20.25■□□□□ 0.83
CDCA8Q53HL2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA8Q53HL2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 ACTG1P17-201ENST00000558391 1119 ntBASIC20.24■□□□□ 0.83
CDCA8Q53HL2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 AC091544.8-201ENST00000619490 361 ntBASIC20.24■□□□□ 0.83
CDCA8Q53HL2 NAP1L6-202ENST00000641404 1222 ntBASIC20.24■□□□□ 0.83
CDCA8Q53HL2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC20.24■□□□□ 0.83
CDCA8Q53HL2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.23■□□□□ 0.83
CDCA8Q53HL2 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 RN7SL774P-201ENST00000577467 290 ntBASIC20.23■□□□□ 0.83
CDCA8Q53HL2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.23■□□□□ 0.83
CDCA8Q53HL2 AL157791.1-201ENST00000553667 1699 ntBASIC20.22■□□□□ 0.83
CDCA8Q53HL2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 AC018629.1-201ENST00000623381 1736 ntBASIC20.22■□□□□ 0.83
CDCA8Q53HL2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 BCYRN1-201ENST00000418539 200 ntBASIC20.22■□□□□ 0.83
CDCA8Q53HL2 SPTLC1P5-201ENST00000450718 252 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms