Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 MYO15B-237ENST00000642007 4893 ntBASIC12.6□□□□□ -0.39
EFNB3Q15768 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB3Q15768 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNB3Q15768 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
EFNB3Q15768 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNB3Q15768 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 AC005077.2-201ENST00000449786 690 ntBASIC12.6□□□□□ -0.39
EFNB3Q15768 RPL18P13-201ENST00000478088 569 ntBASIC12.6□□□□□ -0.39
EFNB3Q15768 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB3Q15768 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 HIST2H2BC-201ENST00000498492 580 ntBASIC12.6□□□□□ -0.39
EFNB3Q15768 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB3Q15768 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB3Q15768 ACTG1P17-201ENST00000558391 1119 ntBASIC12.6□□□□□ -0.39
EFNB3Q15768 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.6□□□□□ -0.39
EFNB3Q15768 AC090164.2-201ENST00000611487 516 ntBASIC12.6□□□□□ -0.39
EFNB3Q15768 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB3Q15768 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.6□□□□□ -0.39
EFNB3Q15768 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB3Q15768 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB3Q15768 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.6□□□□□ -0.39
EFNB3Q15768 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
EFNB3Q15768 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB3Q15768 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
EFNB3Q15768 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 AC092135.3-201ENST00000624151 1846 ntBASIC12.6□□□□□ -0.39
EFNB3Q15768 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB3Q15768 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
EFNB3Q15768 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.6□□□□□ -0.39
EFNB3Q15768 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
EFNB3Q15768 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
EFNB3Q15768 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 AGAP7P-201ENST00000582299 2062 ntBASIC12.59□□□□□ -0.39
EFNB3Q15768 AGAP14-201ENST00000624701 2060 ntBASIC12.59□□□□□ -0.39
EFNB3Q15768 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
EFNB3Q15768 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 MIR769-201ENST00000390225 118 ntBASIC12.59□□□□□ -0.39
EFNB3Q15768 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 AC104073.2-201ENST00000453737 312 ntBASIC12.59□□□□□ -0.39
EFNB3Q15768 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.59□□□□□ -0.39
EFNB3Q15768 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.59□□□□□ -0.39
EFNB3Q15768 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.59□□□□□ -0.39
EFNB3Q15768 AL645939.5-201ENST00000606834 243 ntBASIC12.59□□□□□ -0.39
EFNB3Q15768 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.59□□□□□ -0.39
EFNB3Q15768 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.59□□□□□ -0.39
EFNB3Q15768 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.59□□□□□ -0.39
EFNB3Q15768 Z98259.2-201ENST00000641583 609 ntBASIC12.59□□□□□ -0.39
EFNB3Q15768 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.59□□□□□ -0.39
EFNB3Q15768 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.59□□□□□ -0.39
EFNB3Q15768 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.59□□□□□ -0.39
EFNB3Q15768 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.59□□□□□ -0.39
EFNB3Q15768 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
EFNB3Q15768 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 TUBBP5-203ENST00000508529 1334 ntBASIC12.59□□□□□ -0.39
EFNB3Q15768 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.59□□□□□ -0.39
EFNB3Q15768 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
EFNB3Q15768 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
EFNB3Q15768 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.58□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms