Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.92■□□□□ 0.78
CGNL1Q0VF96 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CGNL1Q0VF96 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 ISCA2P1-201ENST00000425548 448 ntBASIC19.91■□□□□ 0.78
CGNL1Q0VF96 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 AP002414.2-201ENST00000591780 3365 ntBASIC19.91■□□□□ 0.78
CGNL1Q0VF96 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGNL1Q0VF96 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 KRT8P21-201ENST00000430398 1491 ntBASIC19.9■□□□□ 0.78
CGNL1Q0VF96 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 LINC02228-204ENST00000642115 2962 ntBASIC19.9■□□□□ 0.78
CGNL1Q0VF96 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 OR2R1P-201ENST00000441404 914 ntBASIC19.9■□□□□ 0.78
CGNL1Q0VF96 MPRIPP1-201ENST00000452433 1089 ntBASIC19.9■□□□□ 0.78
CGNL1Q0VF96 RPS2P36-201ENST00000456516 831 ntBASIC19.9■□□□□ 0.78
CGNL1Q0VF96 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 AC090857.1-201ENST00000527400 390 ntBASIC19.9■□□□□ 0.78
CGNL1Q0VF96 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 AHCYP4-201ENST00000419201 1315 ntBASIC19.9■□□□□ 0.78
CGNL1Q0VF96 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 MYADML-201ENST00000474610 2147 ntBASIC19.9■□□□□ 0.78
CGNL1Q0VF96 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGNL1Q0VF96 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CGNL1Q0VF96 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CGNL1Q0VF96 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.89■□□□□ 0.78
CGNL1Q0VF96 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CGNL1Q0VF96 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 AGGF1P1-201ENST00000509500 2073 ntBASIC19.89■□□□□ 0.77
CGNL1Q0VF96 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 AC007274.2-201ENST00000421675 662 ntBASIC19.89■□□□□ 0.77
CGNL1Q0VF96 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 AC134698.3-201ENST00000523880 214 ntBASIC19.89■□□□□ 0.77
CGNL1Q0VF96 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 FGFR3P5-201ENST00000564496 886 ntBASIC19.89■□□□□ 0.77
CGNL1Q0VF96 MIR3907-201ENST00000579424 151 ntBASIC19.89■□□□□ 0.77
CGNL1Q0VF96 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 AC079336.7-201ENST00000623428 1078 ntBASIC19.89■□□□□ 0.77
CGNL1Q0VF96 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGNL1Q0VF96 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms