Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.1■□□□□ 0.65
COL16A1Q07092 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC19.1■□□□□ 0.65
COL16A1Q07092 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC19.1■□□□□ 0.65
COL16A1Q07092 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COL16A1Q07092 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC19.1■□□□□ 0.65
COL16A1Q07092 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC19.1■□□□□ 0.65
COL16A1Q07092 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 AC015688.4-201ENST00000580780 1647 ntBASIC19.1■□□□□ 0.65
COL16A1Q07092 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL16A1Q07092 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.09■□□□□ 0.65
COL16A1Q07092 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.09■□□□□ 0.65
COL16A1Q07092 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.09■□□□□ 0.65
COL16A1Q07092 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.09■□□□□ 0.65
COL16A1Q07092 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 AC026884.1-201ENST00000418296 457 ntBASIC19.09■□□□□ 0.65
COL16A1Q07092 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC19.09■□□□□ 0.65
COL16A1Q07092 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19.09■□□□□ 0.65
COL16A1Q07092 RNA5SP288-201ENST00000516075 93 ntBASIC19.09■□□□□ 0.65
COL16A1Q07092 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC19.09■□□□□ 0.65
COL16A1Q07092 AL049840.2-201ENST00000602722 535 ntBASIC19.09■□□□□ 0.65
COL16A1Q07092 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.09■□□□□ 0.65
COL16A1Q07092 AC015912.3-201ENST00000619432 348 ntBASIC19.09■□□□□ 0.65
COL16A1Q07092 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
COL16A1Q07092 AC138627.1-201ENST00000641127 1257 ntBASIC19.09■□□□□ 0.65
COL16A1Q07092 AC126365.1-201ENST00000578585 1514 ntBASIC19.09■□□□□ 0.65
COL16A1Q07092 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL16A1Q07092 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.09■□□□□ 0.65
COL16A1Q07092 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC19.09■□□□□ 0.65
COL16A1Q07092 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 LINC02199-201ENST00000506655 2702 ntBASIC19.09■□□□□ 0.65
COL16A1Q07092 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL16A1Q07092 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
COL16A1Q07092 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC19.08■□□□□ 0.65
COL16A1Q07092 C18orf15-201ENST00000623680 2534 ntBASIC19.08■□□□□ 0.65
COL16A1Q07092 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.08■□□□□ 0.65
COL16A1Q07092 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.08■□□□□ 0.65
COL16A1Q07092 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.08■□□□□ 0.65
COL16A1Q07092 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
COL16A1Q07092 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
COL16A1Q07092 CICP23-201ENST00000605013 2741 ntBASIC19.08■□□□□ 0.65
COL16A1Q07092 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
COL16A1Q07092 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL16A1Q07092 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL16A1Q07092 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL16A1Q07092 OR7E12P-201ENST00000344740 973 ntBASIC19.08■□□□□ 0.65
COL16A1Q07092 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL16A1Q07092 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC19.08■□□□□ 0.65
COL16A1Q07092 ASS1P1-201ENST00000402854 1237 ntBASIC19.08■□□□□ 0.65
COL16A1Q07092 WDR54-202ENST00000409791 854 ntTSL 3 BASIC19.08■□□□□ 0.65
COL16A1Q07092 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC19.08■□□□□ 0.65
COL16A1Q07092 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC19.08■□□□□ 0.65
COL16A1Q07092 RNA5SP420-201ENST00000516997 137 ntBASIC19.08■□□□□ 0.65
COL16A1Q07092 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC19.08■□□□□ 0.65
COL16A1Q07092 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC19.08■□□□□ 0.65
COL16A1Q07092 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC19.08■□□□□ 0.65
COL16A1Q07092 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL16A1Q07092 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
COL16A1Q07092 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL16A1Q07092 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL16A1Q07092 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.08■□□□□ 0.64
COL16A1Q07092 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.08■□□□□ 0.64
COL16A1Q07092 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.08■□□□□ 0.64
COL16A1Q07092 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
COL16A1Q07092 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL16A1Q07092 PCDHA1-201ENST00000378133 2726 ntBASIC19.08■□□□□ 0.64
COL16A1Q07092 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
COL16A1Q07092 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC19.07■□□□□ 0.64
COL16A1Q07092 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL16A1Q07092 TUBB2BP1-201ENST00000404155 871 ntBASIC19.07■□□□□ 0.64
COL16A1Q07092 TBC1D27-202ENST00000424239 1573 ntBASIC19.07■□□□□ 0.64
COL16A1Q07092 AC010086.2-201ENST00000428616 226 ntBASIC19.07■□□□□ 0.64
COL16A1Q07092 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC19.07■□□□□ 0.64
COL16A1Q07092 RN7SL838P-201ENST00000481676 295 ntBASIC19.07■□□□□ 0.64
COL16A1Q07092 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC19.07■□□□□ 0.64
COL16A1Q07092 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC19.07■□□□□ 0.64
COL16A1Q07092 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC19.07■□□□□ 0.64
COL16A1Q07092 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL16A1Q07092 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.07■□□□□ 0.64
COL16A1Q07092 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL16A1Q07092 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL16A1Q07092 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms