Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CDK5Q00535 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDK5Q00535 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CDK5Q00535 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDK5Q00535 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDK5Q00535 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDK5Q00535 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.36□□□□□ -0.27
CDK5Q00535 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CDK5Q00535 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDK5Q00535 AC099521.3-201ENST00000624251 2938 ntBASIC13.36□□□□□ -0.27
CDK5Q00535 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDK5Q00535 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDK5Q00535 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.36□□□□□ -0.27
CDK5Q00535 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.36□□□□□ -0.27
CDK5Q00535 AL157996.1-201ENST00000624684 2299 ntBASIC13.36□□□□□ -0.27
CDK5Q00535 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDK5Q00535 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CDK5Q00535 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CDK5Q00535 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.35□□□□□ -0.27
CDK5Q00535 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.35□□□□□ -0.27
CDK5Q00535 AC027612.1-201ENST00000445234 2395 ntBASIC13.35□□□□□ -0.27
CDK5Q00535 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
CDK5Q00535 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CDK5Q00535 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.35□□□□□ -0.27
CDK5Q00535 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 RN7SKP230-201ENST00000365642 335 ntBASIC13.35□□□□□ -0.27
CDK5Q00535 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CDK5Q00535 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 C1QBPP1-201ENST00000400117 770 ntBASIC13.35□□□□□ -0.27
CDK5Q00535 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.35□□□□□ -0.27
CDK5Q00535 MEP1AP4-201ENST00000423244 1087 ntBASIC13.35□□□□□ -0.27
CDK5Q00535 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.35□□□□□ -0.27
CDK5Q00535 DOC2GP-202ENST00000514950 1163 ntBASIC13.35□□□□□ -0.27
CDK5Q00535 IGHV3-42-201ENST00000520410 361 ntBASIC13.35□□□□□ -0.27
CDK5Q00535 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.35□□□□□ -0.27
CDK5Q00535 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.35□□□□□ -0.27
CDK5Q00535 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CDK5Q00535 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.35□□□□□ -0.27
CDK5Q00535 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CDK5Q00535 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.35□□□□□ -0.27
CDK5Q00535 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CDK5Q00535 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 LRRC59-203ENST00000576448 1531 ntBASIC13.34□□□□□ -0.27
CDK5Q00535 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.34□□□□□ -0.27
CDK5Q00535 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.34□□□□□ -0.27
CDK5Q00535 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CDK5Q00535 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.34□□□□□ -0.27
CDK5Q00535 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDK5Q00535 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CDK5Q00535 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDK5Q00535 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.34□□□□□ -0.27
CDK5Q00535 ACTBP8-201ENST00000403258 1108 ntBASIC13.34□□□□□ -0.27
CDK5Q00535 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.34□□□□□ -0.27
CDK5Q00535 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.34□□□□□ -0.27
CDK5Q00535 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.34□□□□□ -0.27
CDK5Q00535 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.34□□□□□ -0.27
CDK5Q00535 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.34□□□□□ -0.27
CDK5Q00535 AC124283.3-201ENST00000570869 594 ntBASIC13.34□□□□□ -0.27
CDK5Q00535 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDK5Q00535 MIR8072-201ENST00000614241 80 ntBASIC13.34□□□□□ -0.27
CDK5Q00535 AP005019.2-201ENST00000615104 511 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms