Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 FAM197Y4-202ENST00000622692 608 ntBASIC11.09□□□□□ -0.63
HIST1H2BDP58876 AL645728.2-202ENST00000641679 227 ntBASIC11.09□□□□□ -0.63
HIST1H2BDP58876 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 TNKS-213ENST00000522110 2900 ntBASIC11.09□□□□□ -0.63
HIST1H2BDP58876 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HIST1H2BDP58876 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 RPS8P6-201ENST00000426177 609 ntBASIC11.08□□□□□ -0.64
HIST1H2BDP58876 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 EEF1DP4-201ENST00000446006 880 ntBASIC11.08□□□□□ -0.64
HIST1H2BDP58876 AC098590.1-201ENST00000468126 897 ntBASIC11.08□□□□□ -0.64
HIST1H2BDP58876 AL162430.1-201ENST00000480705 870 ntBASIC11.08□□□□□ -0.64
HIST1H2BDP58876 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 ADM-205ENST00000528544 586 ntTSL 2 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 AL589182.2-201ENST00000619332 1049 ntBASIC11.08□□□□□ -0.64
HIST1H2BDP58876 AL049637.2-201ENST00000641778 930 ntBASIC11.08□□□□□ -0.64
HIST1H2BDP58876 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 PPP1R26P1-201ENST00000474415 3613 ntBASIC11.08□□□□□ -0.64
HIST1H2BDP58876 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HIST1H2BDP58876 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HIST1H2BDP58876 AL136982.4-201ENST00000437689 1740 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms