Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN8P56748 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN8P56748 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CLDN8P56748 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 FAM207CP-201ENST00000443486 507 ntBASIC14.07□□□□□ -0.16
CLDN8P56748 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDN8P56748 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.07□□□□□ -0.16
CLDN8P56748 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLDN8P56748 AC020910.5-201ENST00000623668 1865 ntBASIC14.07□□□□□ -0.16
CLDN8P56748 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN8P56748 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLDN8P56748 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN8P56748 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN8P56748 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CLDN8P56748 AL590440.2-201ENST00000641973 1595 ntBASIC14.06□□□□□ -0.16
CLDN8P56748 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CLDN8P56748 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.06□□□□□ -0.16
CLDN8P56748 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.06□□□□□ -0.16
CLDN8P56748 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 AC092183.1-201ENST00000469884 875 ntBASIC14.06□□□□□ -0.16
CLDN8P56748 FTLP10-202ENST00000505798 471 ntBASIC14.06□□□□□ -0.16
CLDN8P56748 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.06□□□□□ -0.16
CLDN8P56748 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN8P56748 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.06□□□□□ -0.16
CLDN8P56748 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN8P56748 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN8P56748 AC008494.3-201ENST00000606615 944 ntBASIC14.06□□□□□ -0.16
CLDN8P56748 AC145423.3-201ENST00000615987 467 ntBASIC14.06□□□□□ -0.16
CLDN8P56748 ENPP7P14-201ENST00000621765 1040 ntBASIC14.06□□□□□ -0.16
CLDN8P56748 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.06□□□□□ -0.16
CLDN8P56748 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN8P56748 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 FKBP4P6-201ENST00000457486 1332 ntBASIC14.06□□□□□ -0.16
CLDN8P56748 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN8P56748 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN8P56748 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms