Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 USO1-201ENST00000264904 4135 ntTSL 2 BASIC14.24□□□□□ -0.13
SH3BGRP55822 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.24□□□□□ -0.13
SH3BGRP55822 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.24□□□□□ -0.13
SH3BGRP55822 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.24□□□□□ -0.13
SH3BGRP55822 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.24□□□□□ -0.13
SH3BGRP55822 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.24□□□□□ -0.13
SH3BGRP55822 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 AC109322.1-201ENST00000524499 1264 ntBASIC14.24□□□□□ -0.13
SH3BGRP55822 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.24□□□□□ -0.13
SH3BGRP55822 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SH3BGRP55822 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.24□□□□□ -0.13
SH3BGRP55822 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.24□□□□□ -0.13
SH3BGRP55822 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.24□□□□□ -0.13
SH3BGRP55822 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SH3BGRP55822 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.24□□□□□ -0.13
SH3BGRP55822 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.24□□□□□ -0.13
SH3BGRP55822 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.24□□□□□ -0.13
SH3BGRP55822 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.24□□□□□ -0.13
SH3BGRP55822 AP001282.1-201ENST00000531301 1499 ntBASIC14.24□□□□□ -0.13
SH3BGRP55822 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SH3BGRP55822 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SH3BGRP55822 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SH3BGRP55822 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 AC092053.3-201ENST00000641308 4975 ntBASIC14.23□□□□□ -0.13
SH3BGRP55822 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.23□□□□□ -0.13
SH3BGRP55822 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SH3BGRP55822 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.23□□□□□ -0.13
SH3BGRP55822 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SH3BGRP55822 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.23□□□□□ -0.13
SH3BGRP55822 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.23□□□□□ -0.13
SH3BGRP55822 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SH3BGRP55822 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SH3BGRP55822 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SH3BGRP55822 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.23□□□□□ -0.13
SH3BGRP55822 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.23□□□□□ -0.13
SH3BGRP55822 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.23□□□□□ -0.13
SH3BGRP55822 AL139010.1-201ENST00000454878 894 ntBASIC14.23□□□□□ -0.13
SH3BGRP55822 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.23□□□□□ -0.13
SH3BGRP55822 AC011467.4-201ENST00000594891 528 ntBASIC14.23□□□□□ -0.13
SH3BGRP55822 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.23□□□□□ -0.13
SH3BGRP55822 AC003101.2-201ENST00000612557 442 ntBASIC14.23□□□□□ -0.13
SH3BGRP55822 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.23□□□□□ -0.13
SH3BGRP55822 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SH3BGRP55822 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SH3BGRP55822 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 AC004899.2-201ENST00000622993 3860 ntBASIC14.23□□□□□ -0.13
SH3BGRP55822 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SH3BGRP55822 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SH3BGRP55822 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SH3BGRP55822 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SH3BGRP55822 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SH3BGRP55822 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SH3BGRP55822 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SH3BGRP55822 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SH3BGRP55822 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.22□□□□□ -0.13
SH3BGRP55822 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SH3BGRP55822 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SH3BGRP55822 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SH3BGRP55822 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SH3BGRP55822 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.22□□□□□ -0.13
SH3BGRP55822 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SH3BGRP55822 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.22□□□□□ -0.13
SH3BGRP55822 AC145098.2-201ENST00000623593 3026 ntBASIC14.22□□□□□ -0.13
SH3BGRP55822 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.22□□□□□ -0.13
SH3BGRP55822 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
SH3BGRP55822 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms