Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HCFC1P51610 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
HCFC1P51610 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 AHCYP4-201ENST00000419201 1315 ntBASIC12.78□□□□□ -0.36
HCFC1P51610 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.78□□□□□ -0.36
HCFC1P51610 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.78□□□□□ -0.36
HCFC1P51610 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HCFC1P51610 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.78□□□□□ -0.36
HCFC1P51610 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.78□□□□□ -0.36
HCFC1P51610 AC012362.1-201ENST00000434906 739 ntBASIC12.78□□□□□ -0.36
HCFC1P51610 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.78□□□□□ -0.36
HCFC1P51610 ORAOV1P1-201ENST00000503108 395 ntBASIC12.78□□□□□ -0.36
HCFC1P51610 AC131206.1-201ENST00000538078 1211 ntBASIC12.78□□□□□ -0.36
HCFC1P51610 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.78□□□□□ -0.36
HCFC1P51610 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.78□□□□□ -0.36
HCFC1P51610 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC12.78□□□□□ -0.36
HCFC1P51610 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HCFC1P51610 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HCFC1P51610 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
HCFC1P51610 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.77□□□□□ -0.36
HCFC1P51610 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.77□□□□□ -0.36
HCFC1P51610 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.77□□□□□ -0.36
HCFC1P51610 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HCFC1P51610 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
HCFC1P51610 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC12.77□□□□□ -0.36
HCFC1P51610 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.77□□□□□ -0.36
HCFC1P51610 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.77□□□□□ -0.36
HCFC1P51610 LINC01815-202ENST00000641468 1409 ntBASIC12.77□□□□□ -0.36
HCFC1P51610 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.77□□□□□ -0.37
HCFC1P51610 HIST2H2BA-201ENST00000412169 381 ntBASIC12.77□□□□□ -0.37
HCFC1P51610 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.77□□□□□ -0.37
HCFC1P51610 AC114947.1-202ENST00000514136 344 ntBASIC12.77□□□□□ -0.37
HCFC1P51610 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC12.77□□□□□ -0.37
HCFC1P51610 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.77□□□□□ -0.37
HCFC1P51610 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.77□□□□□ -0.37
HCFC1P51610 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 AL161773.1-201ENST00000624845 863 ntBASIC12.77□□□□□ -0.37
HCFC1P51610 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.77□□□□□ -0.37
HCFC1P51610 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HCFC1P51610 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HCFC1P51610 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HCFC1P51610 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HCFC1P51610 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.77□□□□□ -0.37
HCFC1P51610 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.77□□□□□ -0.37
HCFC1P51610 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HCFC1P51610 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HCFC1P51610 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HCFC1P51610 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HCFC1P51610 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.76□□□□□ -0.37
HCFC1P51610 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HCFC1P51610 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HCFC1P51610 KHSRPP1-201ENST00000427983 1768 ntBASIC12.76□□□□□ -0.37
HCFC1P51610 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HCFC1P51610 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.76□□□□□ -0.37
HCFC1P51610 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HCFC1P51610 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HCFC1P51610 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.76□□□□□ -0.37
HCFC1P51610 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.76□□□□□ -0.37
HCFC1P51610 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.76□□□□□ -0.37
HCFC1P51610 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.76□□□□□ -0.37
HCFC1P51610 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HCFC1P51610 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms