Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6P35125 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6P35125 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 BCAS2P2-201ENST00000425064 674 ntBASIC19.5■□□□□ 0.71
USP6P35125 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC19.5■□□□□ 0.71
USP6P35125 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 PPIA-210ENST00000620047 827 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6P35125 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6P35125 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6P35125 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.49■□□□□ 0.71
USP6P35125 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
USP6P35125 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC19.49■□□□□ 0.71
USP6P35125 REEP5-205ENST00000504247 480 ntTSL 5 BASIC19.49■□□□□ 0.71
USP6P35125 AC093909.3-201ENST00000504783 336 ntBASIC19.49■□□□□ 0.71
USP6P35125 AC093826.1-201ENST00000508655 993 ntBASIC19.49■□□□□ 0.71
USP6P35125 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.49■□□□□ 0.71
USP6P35125 AC006158.1-201ENST00000610661 249 ntBASIC19.49■□□□□ 0.71
USP6P35125 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC19.49■□□□□ 0.71
USP6P35125 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USP6P35125 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
USP6P35125 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6P35125 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6P35125 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
USP6P35125 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.48■□□□□ 0.71
USP6P35125 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC19.48■□□□□ 0.71
USP6P35125 LINC00265-2P-201ENST00000413372 782 ntBASIC19.48■□□□□ 0.71
USP6P35125 BX679664.3-201ENST00000414070 555 ntBASIC19.48■□□□□ 0.71
USP6P35125 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 RPL35P9-201ENST00000446059 350 ntBASIC19.48■□□□□ 0.71
USP6P35125 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 AC113935.1-201ENST00000471722 555 ntBASIC19.48■□□□□ 0.71
USP6P35125 AC005740.1-201ENST00000515639 522 ntBASIC19.48■□□□□ 0.71
USP6P35125 KRT8P2-201ENST00000556193 944 ntBASIC19.48■□□□□ 0.71
USP6P35125 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC19.48■□□□□ 0.71
USP6P35125 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC19.48■□□□□ 0.71
USP6P35125 MIR6074-201ENST00000612054 107 ntBASIC19.48■□□□□ 0.71
USP6P35125 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC19.48■□□□□ 0.71
USP6P35125 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
USP6P35125 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.48■□□□□ 0.71
USP6P35125 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6P35125 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms