Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HOXA6P31267 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXA6P31267 FUCA1P1-201ENST00000374476 1351 ntBASIC14.34□□□□□ -0.11
HOXA6P31267 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 C18orf15-201ENST00000623680 2534 ntBASIC14.34□□□□□ -0.11
HOXA6P31267 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HOXA6P31267 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXA6P31267 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXA6P31267 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXA6P31267 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXA6P31267 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXA6P31267 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HOXA6P31267 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXA6P31267 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HOXA6P31267 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HOXA6P31267 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXA6P31267 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 AC006529.1-201ENST00000459978 637 ntBASIC14.33□□□□□ -0.12
HOXA6P31267 AC008026.2-201ENST00000495438 348 ntBASIC14.33□□□□□ -0.12
HOXA6P31267 IGHV1-12-201ENST00000518307 205 ntBASIC14.33□□□□□ -0.12
HOXA6P31267 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXA6P31267 EIF5AP2-201ENST00000585668 1047 ntBASIC14.33□□□□□ -0.12
HOXA6P31267 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXA6P31267 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
HOXA6P31267 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXA6P31267 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXA6P31267 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXA6P31267 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HOXA6P31267 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HOXA6P31267 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 PRAL-201ENST00000624952 3286 ntBASIC14.32□□□□□ -0.12
HOXA6P31267 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HOXA6P31267 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXA6P31267 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HOXA6P31267 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HOXA6P31267 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.32□□□□□ -0.12
HOXA6P31267 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HOXA6P31267 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 AC006987.1-201ENST00000413610 527 ntBASIC14.32□□□□□ -0.12
HOXA6P31267 VENTXP4-201ENST00000449029 958 ntBASIC14.32□□□□□ -0.12
HOXA6P31267 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 AC026470.1-201ENST00000478038 846 ntBASIC14.32□□□□□ -0.12
HOXA6P31267 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.32□□□□□ -0.12
HOXA6P31267 AC083801.1-201ENST00000491689 358 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms