Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.06■□□□□ 0
NFKB1P19838 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.05■□□□□ 0
NFKB1P19838 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.05■□□□□ 0
NFKB1P19838 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
NFKB1P19838 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
NFKB1P19838 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
NFKB1P19838 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
NFKB1P19838 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.05■□□□□ 0
NFKB1P19838 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.05■□□□□ -0
NFKB1P19838 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
NFKB1P19838 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.05■□□□□ -0
NFKB1P19838 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
NFKB1P19838 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.05■□□□□ -0
NFKB1P19838 CR383656.12-201ENST00000549567 513 ntBASIC15.05■□□□□ -0
NFKB1P19838 AC103988.2-201ENST00000561804 725 ntBASIC15.05■□□□□ -0
NFKB1P19838 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.05■□□□□ -0
NFKB1P19838 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
NFKB1P19838 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.05■□□□□ -0
NFKB1P19838 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.05■□□□□ -0
NFKB1P19838 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.05■□□□□ -0
NFKB1P19838 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.05■□□□□ -0
NFKB1P19838 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NFKB1P19838 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 AC012617.1-204ENST00000586340 2305 ntBASIC15.05■□□□□ -0
NFKB1P19838 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NFKB1P19838 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.05■□□□□ -0
NFKB1P19838 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NFKB1P19838 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 AC139712.1-201ENST00000378256 1875 ntBASIC15.04■□□□□ -0
NFKB1P19838 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 AC215219.1-201ENST00000400706 1817 ntBASIC15.04■□□□□ -0
NFKB1P19838 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.04■□□□□ -0
NFKB1P19838 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.04■□□□□ -0
NFKB1P19838 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 MIR1202-201ENST00000408529 83 ntBASIC15.04■□□□□ -0
NFKB1P19838 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 CD8B2-202ENST00000417670 633 ntBASIC15.04■□□□□ -0
NFKB1P19838 ARSEP1-201ENST00000420443 635 ntBASIC15.04■□□□□ -0
NFKB1P19838 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.04■□□□□ -0
NFKB1P19838 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 PUDPP3-201ENST00000445368 636 ntBASIC15.04■□□□□ -0
NFKB1P19838 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
NFKB1P19838 COX5BP1-201ENST00000507622 393 ntBASIC15.04■□□□□ -0
NFKB1P19838 ALG3P1-201ENST00000508806 1114 ntBASIC15.04■□□□□ -0
NFKB1P19838 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.04■□□□□ -0
NFKB1P19838 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.04■□□□□ -0
NFKB1P19838 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.04■□□□□ -0
NFKB1P19838 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
NFKB1P19838 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.04■□□□□ -0
NFKB1P19838 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.04■□□□□ -0
NFKB1P19838 AC073413.1-201ENST00000603927 732 ntBASIC15.04■□□□□ -0
NFKB1P19838 AC002472.3-201ENST00000640124 621 ntBASIC15.04■□□□□ -0
NFKB1P19838 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NFKB1P19838 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.04■□□□□ -0
NFKB1P19838 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms