Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 MST1P2-201ENST00000457982 2291 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.05□□□□□ -0.32
UBCP0CG48 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 AC134915.1-201ENST00000426461 574 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 AC007969.1-201ENST00000433675 447 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.05□□□□□ -0.32
UBCP0CG48 AC114812.1-204ENST00000449669 728 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.05□□□□□ -0.32
UBCP0CG48 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 DOC2GP-202ENST00000514950 1163 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.05□□□□□ -0.32
UBCP0CG48 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 DUX4L27-201ENST00000554796 1261 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 AC023310.3-201ENST00000557027 670 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 AC100756.1-201ENST00000562736 682 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 AC138749.3-201ENST00000567691 622 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.05□□□□□ -0.32
UBCP0CG48 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.05□□□□□ -0.32
UBCP0CG48 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 AP001160.2-201ENST00000596071 487 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 AC116165.1-201ENST00000611806 668 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBCP0CG48 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
UBCP0CG48 PPT1-213ENST00000641319 2388 ntBASIC13.05□□□□□ -0.32
UBCP0CG48 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBCP0CG48 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.04□□□□□ -0.32
UBCP0CG48 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.04□□□□□ -0.32
UBCP0CG48 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.04□□□□□ -0.32
UBCP0CG48 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 AC089987.1-201ENST00000551654 2209 ntBASIC13.04□□□□□ -0.32
UBCP0CG48 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
UBCP0CG48 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
UBCP0CG48 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
UBCP0CG48 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
UBCP0CG48 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 AC055876.3-201ENST00000431496 288 ntBASIC13.04□□□□□ -0.32
UBCP0CG48 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.04□□□□□ -0.32
UBCP0CG48 AL512638.1-201ENST00000457493 794 ntBASIC13.04□□□□□ -0.32
UBCP0CG48 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.04□□□□□ -0.32
UBCP0CG48 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.04□□□□□ -0.32
UBCP0CG48 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.04□□□□□ -0.32
UBCP0CG48 AC138649.4-201ENST00000612222 287 ntBASIC13.04□□□□□ -0.32
UBCP0CG48 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.04□□□□□ -0.32
UBCP0CG48 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.04□□□□□ -0.32
UBCP0CG48 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.04□□□□□ -0.32
UBCP0CG48 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.04□□□□□ -0.32
UBCP0CG48 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.04□□□□□ -0.32
UBCP0CG48 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.04□□□□□ -0.32
UBCP0CG48 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.04□□□□□ -0.32
UBCP0CG48 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms