Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HMGN1P05114 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.47□□□□□ -0.25
HMGN1P05114 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.47□□□□□ -0.25
HMGN1P05114 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.47□□□□□ -0.25
HMGN1P05114 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMGN1P05114 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 AL136172.1-201ENST00000598590 1394 ntBASIC13.46□□□□□ -0.25
HMGN1P05114 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HMGN1P05114 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 AC215219.1-201ENST00000400706 1817 ntBASIC13.46□□□□□ -0.25
HMGN1P05114 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
HMGN1P05114 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.46□□□□□ -0.25
HMGN1P05114 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.46□□□□□ -0.25
HMGN1P05114 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGN1P05114 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 AC114812.1-204ENST00000449669 728 ntBASIC13.46□□□□□ -0.25
HMGN1P05114 AC009477.1-201ENST00000452936 217 ntBASIC13.46□□□□□ -0.25
HMGN1P05114 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGN1P05114 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.46□□□□□ -0.25
HMGN1P05114 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
HMGN1P05114 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
HMGN1P05114 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.46□□□□□ -0.25
HMGN1P05114 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGN1P05114 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGN1P05114 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.46□□□□□ -0.25
HMGN1P05114 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.46□□□□□ -0.25
HMGN1P05114 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.46□□□□□ -0.25
HMGN1P05114 AC134684.3-201ENST00000641758 218 ntBASIC13.46□□□□□ -0.25
HMGN1P05114 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
HMGN1P05114 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.46□□□□□ -0.25
HMGN1P05114 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGN1P05114 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMGN1P05114 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.46□□□□□ -0.26
HMGN1P05114 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGN1P05114 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGN1P05114 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGN1P05114 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGN1P05114 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
HMGN1P05114 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HMGN1P05114 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
HMGN1P05114 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGN1P05114 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
HMGN1P05114 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.26
HMGN1P05114 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.45□□□□□ -0.26
HMGN1P05114 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGN1P05114 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms