Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 KHSRPP1-201ENST00000427983 1768 ntBASIC12.46□□□□□ -0.41
CD74P04233 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CD74P04233 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
CD74P04233 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 AL138799.1-201ENST00000448213 1675 ntBASIC12.46□□□□□ -0.41
CD74P04233 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CD74P04233 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CD74P04233 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
CD74P04233 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CD74P04233 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.46□□□□□ -0.41
CD74P04233 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.46□□□□□ -0.41
CD74P04233 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.46□□□□□ -0.41
CD74P04233 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.46□□□□□ -0.41
CD74P04233 HTR5BP-201ENST00000430851 1154 ntBASIC12.46□□□□□ -0.41
CD74P04233 AC007969.1-201ENST00000433675 447 ntBASIC12.46□□□□□ -0.41
CD74P04233 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.46□□□□□ -0.41
CD74P04233 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CD74P04233 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.46□□□□□ -0.41
CD74P04233 AC010336.2-201ENST00000564226 506 ntBASIC12.46□□□□□ -0.41
CD74P04233 AC051619.7-201ENST00000568314 623 ntBASIC12.46□□□□□ -0.41
CD74P04233 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.46□□□□□ -0.41
CD74P04233 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.46□□□□□ -0.41
CD74P04233 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CD74P04233 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CD74P04233 AL513210.1-201ENST00000629608 234 ntBASIC12.46□□□□□ -0.41
CD74P04233 AL109936.8-201ENST00000641772 604 ntBASIC12.46□□□□□ -0.41
CD74P04233 PRSS30P-206ENST00000641773 873 ntBASIC12.46□□□□□ -0.41
CD74P04233 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CD74P04233 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
CD74P04233 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
CD74P04233 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CD74P04233 AC003102.2-201ENST00000589195 1469 ntBASIC12.46□□□□□ -0.42
CD74P04233 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD74P04233 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.46□□□□□ -0.42
CD74P04233 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CD74P04233 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CD74P04233 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CD74P04233 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CD74P04233 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.45□□□□□ -0.42
CD74P04233 NUS1P3-201ENST00000423502 862 ntBASIC12.45□□□□□ -0.42
CD74P04233 RN7SL618P-201ENST00000477850 296 ntBASIC12.45□□□□□ -0.42
CD74P04233 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD74P04233 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.45□□□□□ -0.42
CD74P04233 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.45□□□□□ -0.42
CD74P04233 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms