Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC1P02654 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 PMS2P2-201ENST00000425039 1128 ntBASIC13.19□□□□□ -0.3
APOC1P02654 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 TPT1P11-201ENST00000458482 498 ntBASIC13.19□□□□□ -0.3
APOC1P02654 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.19□□□□□ -0.3
APOC1P02654 ENPP7P5-201ENST00000541031 1031 ntBASIC13.19□□□□□ -0.3
APOC1P02654 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.19□□□□□ -0.3
APOC1P02654 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.19□□□□□ -0.3
APOC1P02654 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
APOC1P02654 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 AC005498.2-205ENST00000593218 784 ntBASIC13.19□□□□□ -0.3
APOC1P02654 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 AC133539.2-201ENST00000604757 467 ntBASIC13.19□□□□□ -0.3
APOC1P02654 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC1P02654 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC1P02654 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC1P02654 KRT8P22-201ENST00000562317 1415 ntBASIC13.19□□□□□ -0.3
APOC1P02654 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
APOC1P02654 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC1P02654 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
APOC1P02654 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.18□□□□□ -0.3
APOC1P02654 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.18□□□□□ -0.3
APOC1P02654 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.18□□□□□ -0.3
APOC1P02654 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.18□□□□□ -0.3
APOC1P02654 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 DUX4L47-201ENST00000566374 394 ntBASIC13.18□□□□□ -0.3
APOC1P02654 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 TMEM261P1-201ENST00000604899 340 ntBASIC13.18□□□□□ -0.3
APOC1P02654 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC1P02654 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC1P02654 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC1P02654 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms