Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTNND1O60716 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CTNND1O60716 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CTNND1O60716 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.17■□□□□ 0.34
CTNND1O60716 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.17■□□□□ 0.34
CTNND1O60716 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CTNND1O60716 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.17■□□□□ 0.34
CTNND1O60716 OR2R1P-201ENST00000441404 914 ntBASIC17.17■□□□□ 0.34
CTNND1O60716 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.17■□□□□ 0.34
CTNND1O60716 AC135983.4-201ENST00000564116 1262 ntBASIC17.17■□□□□ 0.34
CTNND1O60716 AC093752.3-201ENST00000567343 901 ntBASIC17.17■□□□□ 0.34
CTNND1O60716 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.17■□□□□ 0.34
CTNND1O60716 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.17■□□□□ 0.34
CTNND1O60716 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CTNND1O60716 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTNND1O60716 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.17■□□□□ 0.34
CTNND1O60716 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTNND1O60716 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 NORAD-201ENST00000565493 5339 ntBASIC17.17■□□□□ 0.34
CTNND1O60716 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTNND1O60716 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CTNND1O60716 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CTNND1O60716 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 LINC02228-204ENST00000642115 2962 ntBASIC17.16■□□□□ 0.34
CTNND1O60716 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.16■□□□□ 0.34
CTNND1O60716 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CTNND1O60716 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.16■□□□□ 0.34
CTNND1O60716 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CTNND1O60716 KRT8P31-201ENST00000504812 1408 ntBASIC17.16■□□□□ 0.34
CTNND1O60716 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.16■□□□□ 0.34
CTNND1O60716 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.16■□□□□ 0.34
CTNND1O60716 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 RNA5SP359-201ENST00000364838 113 ntBASIC17.16■□□□□ 0.34
CTNND1O60716 AL512430.1-201ENST00000392575 860 ntBASIC17.16■□□□□ 0.34
CTNND1O60716 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.16■□□□□ 0.34
CTNND1O60716 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.16■□□□□ 0.34
CTNND1O60716 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.16■□□□□ 0.34
CTNND1O60716 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.16■□□□□ 0.34
CTNND1O60716 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.16■□□□□ 0.34
CTNND1O60716 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.16■□□□□ 0.34
CTNND1O60716 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.16■□□□□ 0.34
CTNND1O60716 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.16■□□□□ 0.34
CTNND1O60716 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.16■□□□□ 0.34
CTNND1O60716 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CTNND1O60716 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CTNND1O60716 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.16■□□□□ 0.34
CTNND1O60716 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.16■□□□□ 0.34
CTNND1O60716 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.16■□□□□ 0.34
CTNND1O60716 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 AP002414.2-201ENST00000591780 3365 ntBASIC17.16■□□□□ 0.34
CTNND1O60716 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CTNND1O60716 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CTNND1O60716 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.16■□□□□ 0.34
CTNND1O60716 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTNND1O60716 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.15■□□□□ 0.34
CTNND1O60716 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.15■□□□□ 0.34
CTNND1O60716 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.15■□□□□ 0.34
CTNND1O60716 AC114947.1-202ENST00000514136 344 ntBASIC17.15■□□□□ 0.34
CTNND1O60716 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms