Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.16□□□□□ -0.62
SNAI2O43623 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.16□□□□□ -0.62
SNAI2O43623 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.16□□□□□ -0.62
SNAI2O43623 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.16□□□□□ -0.62
SNAI2O43623 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
SNAI2O43623 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.16□□□□□ -0.62
SNAI2O43623 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.16□□□□□ -0.62
SNAI2O43623 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.16□□□□□ -0.62
SNAI2O43623 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 MCCD1P2-201ENST00000423228 335 ntBASIC11.16□□□□□ -0.62
SNAI2O43623 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.16□□□□□ -0.62
SNAI2O43623 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 AC022447.6-201ENST00000515522 438 ntBASIC11.16□□□□□ -0.62
SNAI2O43623 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
SNAI2O43623 SAMD11P1-201ENST00000571429 661 ntBASIC11.16□□□□□ -0.62
SNAI2O43623 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
SNAI2O43623 AC007967.4-201ENST00000614700 386 ntBASIC11.16□□□□□ -0.62
SNAI2O43623 MIR6069-201ENST00000620069 79 ntBASIC11.16□□□□□ -0.62
SNAI2O43623 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
SNAI2O43623 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.16□□□□□ -0.62
SNAI2O43623 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
SNAI2O43623 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
SNAI2O43623 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.16□□□□□ -0.62
SNAI2O43623 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.16□□□□□ -0.62
SNAI2O43623 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
SNAI2O43623 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SNAI2O43623 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 KRT18P64-201ENST00000434946 1219 ntBASIC11.15□□□□□ -0.62
SNAI2O43623 MKNK2P1-201ENST00000437526 628 ntBASIC11.15□□□□□ -0.62
SNAI2O43623 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.15□□□□□ -0.62
SNAI2O43623 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.15□□□□□ -0.62
SNAI2O43623 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SNAI2O43623 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.15□□□□□ -0.62
SNAI2O43623 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.15□□□□□ -0.62
SNAI2O43623 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.15□□□□□ -0.62
SNAI2O43623 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.15□□□□□ -0.62
SNAI2O43623 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.15□□□□□ -0.62
SNAI2O43623 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SNAI2O43623 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SNAI2O43623 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms