Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
NDUFA1O15239 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 AC254562.1-201ENST00000417586 456 ntBASIC10.18□□□□□ -0.78
NDUFA1O15239 AL080243.2-201ENST00000418783 582 ntBASIC10.18□□□□□ -0.78
NDUFA1O15239 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 UPF3AP3-201ENST00000420996 769 ntBASIC10.18□□□□□ -0.78
NDUFA1O15239 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.18□□□□□ -0.78
NDUFA1O15239 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.18□□□□□ -0.78
NDUFA1O15239 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC10.18□□□□□ -0.78
NDUFA1O15239 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.18□□□□□ -0.78
NDUFA1O15239 AL512356.2-201ENST00000546955 174 ntBASIC10.18□□□□□ -0.78
NDUFA1O15239 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC10.18□□□□□ -0.78
NDUFA1O15239 SNHG9-202ENST00000564014 471 ntBASIC10.18□□□□□ -0.78
NDUFA1O15239 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.18□□□□□ -0.78
NDUFA1O15239 AC025048.3-201ENST00000590609 569 ntBASIC10.18□□□□□ -0.78
NDUFA1O15239 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.18□□□□□ -0.78
NDUFA1O15239 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 AC005702.4-201ENST00000618393 416 ntBASIC10.18□□□□□ -0.78
NDUFA1O15239 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.18□□□□□ -0.78
NDUFA1O15239 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
NDUFA1O15239 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.18□□□□□ -0.78
NDUFA1O15239 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC10.18□□□□□ -0.78
NDUFA1O15239 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NDUFA1O15239 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC10.17□□□□□ -0.78
NDUFA1O15239 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
NDUFA1O15239 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
NDUFA1O15239 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
NDUFA1O15239 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.17□□□□□ -0.78
NDUFA1O15239 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NDUFA1O15239 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms