Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.9□□□□□ -0.5
UPK2O00526 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
UPK2O00526 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
UPK2O00526 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.9□□□□□ -0.5
UPK2O00526 AC009486.1-201ENST00000569860 813 ntBASIC11.9□□□□□ -0.5
UPK2O00526 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.9□□□□□ -0.5
UPK2O00526 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.9□□□□□ -0.5
UPK2O00526 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.9□□□□□ -0.5
UPK2O00526 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.9□□□□□ -0.5
UPK2O00526 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.9□□□□□ -0.5
UPK2O00526 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.9□□□□□ -0.5
UPK2O00526 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UPK2O00526 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.9□□□□□ -0.51
UPK2O00526 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.9□□□□□ -0.51
UPK2O00526 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
UPK2O00526 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
UPK2O00526 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
UPK2O00526 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.9□□□□□ -0.51
UPK2O00526 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
UPK2O00526 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
UPK2O00526 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
UPK2O00526 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
UPK2O00526 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK2O00526 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK2O00526 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
UPK2O00526 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
UPK2O00526 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UPK2O00526 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 AC010327.5-201ENST00000586923 3061 ntBASIC11.89□□□□□ -0.51
UPK2O00526 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
UPK2O00526 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UPK2O00526 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.89□□□□□ -0.51
UPK2O00526 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.89□□□□□ -0.51
UPK2O00526 TSPY16P-201ENST00000449843 468 ntBASIC11.89□□□□□ -0.51
UPK2O00526 AC092183.1-201ENST00000469884 875 ntBASIC11.89□□□□□ -0.51
UPK2O00526 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.89□□□□□ -0.51
UPK2O00526 AJ011932.1-201ENST00000621707 465 ntBASIC11.89□□□□□ -0.51
UPK2O00526 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK2O00526 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
UPK2O00526 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.89□□□□□ -0.51
UPK2O00526 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
UPK2O00526 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.89□□□□□ -0.51
UPK2O00526 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.89□□□□□ -0.51
UPK2O00526 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
UPK2O00526 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UPK2O00526 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
UPK2O00526 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UPK2O00526 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UPK2O00526 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
UPK2O00526 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK2O00526 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.88□□□□□ -0.51
UPK2O00526 KRT8P24-201ENST00000560290 1559 ntBASIC11.88□□□□□ -0.51
UPK2O00526 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UPK2O00526 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms