Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF346Q9UL40 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 TLE1P1-201ENST00000422965 589 ntBASIC13.37□□□□□ -0.27
ZNF346Q9UL40 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 AC005034.1-201ENST00000426657 489 ntBASIC13.37□□□□□ -0.27
ZNF346Q9UL40 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 RN7SL752P-201ENST00000463779 287 ntBASIC13.37□□□□□ -0.27
ZNF346Q9UL40 AP005018.1-201ENST00000525475 301 ntBASIC13.37□□□□□ -0.27
ZNF346Q9UL40 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 AC009486.1-201ENST00000569860 813 ntBASIC13.37□□□□□ -0.27
ZNF346Q9UL40 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF346Q9UL40 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AL136172.1-201ENST00000598590 1394 ntBASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.36□□□□□ -0.27
ZNF346Q9UL40 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 DGCR5-201ENST00000399539 862 ntBASIC13.36□□□□□ -0.27
ZNF346Q9UL40 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF346Q9UL40 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms