Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 RHEB-207ENST00000496004 744 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AC024681.1-201ENST00000521917 487 ntBASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 NAP1L6-202ENST00000641404 1222 ntBASIC19.57■□□□□ 0.72
NPC1L1Q9UHC9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 CYP46A4P-201ENST00000414953 267 ntBASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 LINC01815-202ENST00000641468 1409 ntBASIC19.56■□□□□ 0.72
NPC1L1Q9UHC9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 PDIA3P2-201ENST00000428073 158 ntBASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPC1L1Q9UHC9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 AC103592.1-201ENST00000394513 664 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms