Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.57□□□□□ -0.24
EMC3Q9P0I2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 AL360270.3-201ENST00000609118 1348 ntBASIC13.57□□□□□ -0.24
EMC3Q9P0I2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 AC018665.1-201ENST00000622927 1362 ntBASIC13.57□□□□□ -0.24
EMC3Q9P0I2 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
EMC3Q9P0I2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 GPR53P-205ENST00000457298 1084 ntBASIC13.56□□□□□ -0.24
EMC3Q9P0I2 USP32P1-208ENST00000506594 1164 ntBASIC13.56□□□□□ -0.24
EMC3Q9P0I2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 AP001889.1-201ENST00000525414 633 ntBASIC13.56□□□□□ -0.24
EMC3Q9P0I2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 AL162274.1-201ENST00000617191 1098 ntBASIC13.56□□□□□ -0.24
EMC3Q9P0I2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 RPSAP52-203ENST00000622976 1023 ntBASIC13.56□□□□□ -0.24
EMC3Q9P0I2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EMC3Q9P0I2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 TMEM14DP-201ENST00000422205 345 ntBASIC13.55□□□□□ -0.24
EMC3Q9P0I2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.55□□□□□ -0.24
EMC3Q9P0I2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EMC3Q9P0I2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms