Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 GPR53P-205ENST00000457298 1084 ntBASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 AC010326.4-201ENST00000604665 891 ntBASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.37□□□□□ -0.11
TIMMDC1Q9NPL8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 AC015818.8-201ENST00000587907 1519 ntBASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 KRT8P22-201ENST00000562317 1415 ntBASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 BRI3BPP1-201ENST00000594224 787 ntBASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 AL121723.1-201ENST00000445194 1519 ntBASIC14.36□□□□□ -0.11
TIMMDC1Q9NPL8 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms