Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AC022494.1-201ENST00000466044 728 ntBASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 AP001063.1-201ENST00000568332 529 ntBASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 AC093525.8-201ENST00000624099 1342 ntBASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 MYO15B-237ENST00000642007 4893 ntBASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF4Q9BUZ4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF4Q9BUZ4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AC012441.1-201ENST00000446669 685 ntBASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AC005252.2-201ENST00000624630 1141 ntBASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AC083964.2-201ENST00000623988 2396 ntBASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 REXO1L6P-201ENST00000603433 1515 ntBASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AC087386.2-201ENST00000623212 4637 ntBASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF4Q9BUZ4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 MIR600HG-201ENST00000449175 5984 ntBASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF4Q9BUZ4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms