Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.57□□□□□ -0.08
NPAS2Q99743 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NPAS2Q99743 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 CICP8-201ENST00000455800 2813 ntBASIC14.57□□□□□ -0.08
NPAS2Q99743 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.57□□□□□ -0.08
NPAS2Q99743 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 GIMAP3P-201ENST00000495150 836 ntBASIC14.57□□□□□ -0.08
NPAS2Q99743 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 AC092552.1-201ENST00000547243 906 ntBASIC14.57□□□□□ -0.08
NPAS2Q99743 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
NPAS2Q99743 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.57□□□□□ -0.08
NPAS2Q99743 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
NPAS2Q99743 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.57□□□□□ -0.08
NPAS2Q99743 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NPAS2Q99743 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS2Q99743 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NPAS2Q99743 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS2Q99743 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NPAS2Q99743 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 AL121723.1-201ENST00000445194 1519 ntBASIC14.56□□□□□ -0.08
NPAS2Q99743 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NPAS2Q99743 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
NPAS2Q99743 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
NPAS2Q99743 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.56□□□□□ -0.08
NPAS2Q99743 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NPAS2Q99743 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.56□□□□□ -0.08
NPAS2Q99743 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.56□□□□□ -0.08
NPAS2Q99743 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 RPSAP52-203ENST00000622976 1023 ntBASIC14.56□□□□□ -0.08
NPAS2Q99743 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.56□□□□□ -0.08
NPAS2Q99743 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.56□□□□□ -0.08
NPAS2Q99743 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.56□□□□□ -0.08
NPAS2Q99743 AC016397.2-201ENST00000624848 1985 ntBASIC14.56□□□□□ -0.08
NPAS2Q99743 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.56□□□□□ -0.08
NPAS2Q99743 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPAS2Q99743 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.56□□□□□ -0.08
NPAS2Q99743 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms