Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH19Q8TAB3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 AL928921.2-201ENST00000641325 2442 ntBASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 GRK6P1-201ENST00000400595 1711 ntBASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 PUDPP3-201ENST00000445368 636 ntBASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH19Q8TAB3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.27■□□□□ 0.03
PCDH19Q8TAB3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
PCDH19Q8TAB3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms