Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 POM121L8P-201ENST00000417732 1281 ntBASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 POM121L9P-203ENST00000441984 1285 ntBASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 GCOM2-201ENST00000509133 1104 ntBASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 MIR4745-201ENST00000577608 62 ntBASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC83Q8IWF9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 AC245100.3-201ENST00000441281 285 ntBASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 TP53TG3HP-202ENST00000569755 579 ntBASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 AC009486.1-201ENST00000569860 813 ntBASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 AC138696.2-201ENST00000607376 223 ntBASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC83Q8IWF9 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.4■□□□□ 0.38
CCDC83Q8IWF9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms