Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 HSPA8P5-201ENST00000456928 2069 ntBASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 AC090643.2-201ENST00000623442 2029 ntBASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 DUX4L47-201ENST00000566374 394 ntBASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 AC107373.2-201ENST00000607735 490 ntBASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 AL596442.2-201ENST00000610240 980 ntBASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 AC073592.8-201ENST00000624126 511 ntBASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 SALL4P5-201ENST00000419001 1760 ntBASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 AC011498.7-201ENST00000624986 2027 ntBASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00242Q5T6M2 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 AL136172.1-201ENST00000598590 1394 ntBASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 AC087499.5-201ENST00000452760 1342 ntBASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 KRT8P35-201ENST00000483942 1338 ntBASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 AC004945.1-201ENST00000416738 983 ntBASIC10.15□□□□□ -0.78
LINC00242Q5T6M2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms