Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFTN2Q52LD8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RFTN2Q52LD8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.28□□□□□ -0.12
RFTN2Q52LD8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RFTN2Q52LD8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RFTN2Q52LD8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RFTN2Q52LD8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 AL138725.1-201ENST00000407347 1314 ntBASIC14.27□□□□□ -0.12
RFTN2Q52LD8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.27□□□□□ -0.12
RFTN2Q52LD8 MRPL37P1-201ENST00000592451 1337 ntBASIC14.27□□□□□ -0.12
RFTN2Q52LD8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 AC131206.1-201ENST00000538078 1211 ntBASIC14.27□□□□□ -0.13
RFTN2Q52LD8 ENPP7P5-201ENST00000541031 1031 ntBASIC14.27□□□□□ -0.13
RFTN2Q52LD8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 AC215219.1-201ENST00000400706 1817 ntBASIC14.27□□□□□ -0.13
RFTN2Q52LD8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.27□□□□□ -0.13
RFTN2Q52LD8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.26□□□□□ -0.13
RFTN2Q52LD8 AC087499.6-201ENST00000411576 835 ntBASIC14.26□□□□□ -0.13
RFTN2Q52LD8 ELK1P1-201ENST00000485699 580 ntBASIC14.26□□□□□ -0.13
RFTN2Q52LD8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 CTBP2P3-201ENST00000585629 1255 ntBASIC14.26□□□□□ -0.13
RFTN2Q52LD8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RFTN2Q52LD8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms