Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.27■□□□□ 0.36
CNTNAP1P78357 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNTNAP1P78357 PPT1-215ENST00000641471 2368 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP1P78357 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP1P78357 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP1P78357 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP1P78357 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP1P78357 AL929302.1-201ENST00000426556 871 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 AC092580.1-201ENST00000433998 658 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 RPL3P5-201ENST00000441645 1232 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP1P78357 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 RN7SL23P-201ENST00000484055 275 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 RN7SL582P-201ENST00000491078 279 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 AC093826.1-201ENST00000508655 993 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 AC226150.1-201ENST00000544259 466 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 AC124068.2-201ENST00000569473 1109 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 AC010976.2-201ENST00000609697 852 ntBASIC17.27■□□□□ 0.35
CNTNAP1P78357 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNTNAP1P78357 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.27■□□□□ 0.35
CNTNAP1P78357 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 AC138035.3-201ENST00000622706 2791 ntBASIC17.26■□□□□ 0.35
CNTNAP1P78357 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.26■□□□□ 0.35
CNTNAP1P78357 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.26■□□□□ 0.35
CNTNAP1P78357 GNG10P1-201ENST00000452289 199 ntBASIC17.26■□□□□ 0.35
CNTNAP1P78357 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNTNAP1P78357 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms