Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC135782.3-201ENST00000562782 2105 ntBASIC13.32□□□□□ -0.28
VBP1P61758 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 SAMD11P1-201ENST00000571429 661 ntBASIC13.32□□□□□ -0.28
VBP1P61758 TP73-AS1-207ENST00000624167 988 ntBASIC13.32□□□□□ -0.28
VBP1P61758 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 AGAP12P-201ENST00000585227 2359 ntBASIC13.32□□□□□ -0.28
VBP1P61758 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.32□□□□□ -0.28
VBP1P61758 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VBP1P61758 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
VBP1P61758 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 AC215219.1-201ENST00000400706 1817 ntBASIC13.32□□□□□ -0.28
VBP1P61758 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.32□□□□□ -0.28
VBP1P61758 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
VBP1P61758 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VBP1P61758 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
VBP1P61758 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 MYADML-201ENST00000474610 2147 ntBASIC13.31□□□□□ -0.28
VBP1P61758 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
VBP1P61758 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
VBP1P61758 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
VBP1P61758 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.31□□□□□ -0.28
VBP1P61758 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.31□□□□□ -0.28
VBP1P61758 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.31□□□□□ -0.28
VBP1P61758 HIST3H2BA-201ENST00000436555 524 ntBASIC13.31□□□□□ -0.28
VBP1P61758 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.31□□□□□ -0.28
VBP1P61758 UNC93B6-202ENST00000528242 690 ntBASIC13.31□□□□□ -0.28
VBP1P61758 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.31□□□□□ -0.28
VBP1P61758 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.31□□□□□ -0.28
VBP1P61758 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.31□□□□□ -0.28
VBP1P61758 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
VBP1P61758 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 AC008267.7-201ENST00000624570 1194 ntBASIC13.31□□□□□ -0.28
VBP1P61758 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VBP1P61758 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
VBP1P61758 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VBP1P61758 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.31□□□□□ -0.28
VBP1P61758 POM121L4P-202ENST00000427789 1891 ntBASIC13.31□□□□□ -0.28
VBP1P61758 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VBP1P61758 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VBP1P61758 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.3□□□□□ -0.28
VBP1P61758 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
VBP1P61758 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms