Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN6P56747 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN6P56747 AC126177.1-201ENST00000547829 2218 ntBASIC14.18□□□□□ -0.14
CLDN6P56747 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLDN6P56747 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN6P56747 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN6P56747 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN6P56747 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLDN6P56747 AC144522.1-201ENST00000625111 1658 ntBASIC14.17□□□□□ -0.14
CLDN6P56747 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 AC023824.1-201ENST00000562945 2975 ntBASIC14.17□□□□□ -0.14
CLDN6P56747 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLDN6P56747 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLDN6P56747 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN6P56747 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN6P56747 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN6P56747 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN6P56747 AC141586.1-203ENST00000567242 366 ntBASIC14.17□□□□□ -0.14
CLDN6P56747 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.17□□□□□ -0.14
CLDN6P56747 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.17□□□□□ -0.14
CLDN6P56747 AC005632.3-201ENST00000605544 308 ntBASIC14.17□□□□□ -0.14
CLDN6P56747 MIR6756-201ENST00000616240 63 ntBASIC14.17□□□□□ -0.14
CLDN6P56747 AC073911.3-201ENST00000624401 631 ntBASIC14.17□□□□□ -0.14
CLDN6P56747 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.17□□□□□ -0.14
CLDN6P56747 AC092299.1-201ENST00000632679 757 ntBASIC14.17□□□□□ -0.14
CLDN6P56747 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.17□□□□□ -0.14
CLDN6P56747 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLDN6P56747 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLDN6P56747 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN6P56747 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN6P56747 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN6P56747 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN6P56747 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLDN6P56747 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CLDN6P56747 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CLDN6P56747 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.16□□□□□ -0.14
CLDN6P56747 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN6P56747 AL157407.1-201ENST00000435784 904 ntBASIC14.16□□□□□ -0.14
CLDN6P56747 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN6P56747 AL645933.1-201ENST00000440087 609 ntBASIC14.16□□□□□ -0.14
CLDN6P56747 AP000358.1-201ENST00000456260 156 ntBASIC14.16□□□□□ -0.14
CLDN6P56747 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.16□□□□□ -0.14
CLDN6P56747 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms