Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 POM121L8P-201ENST00000417732 1281 ntBASIC13.16□□□□□ -0.3
SLC25A1P53007 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 POM121L9P-203ENST00000441984 1285 ntBASIC13.16□□□□□ -0.3
SLC25A1P53007 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.16□□□□□ -0.3
SLC25A1P53007 AC004233.3-201ENST00000607794 1269 ntBASIC13.16□□□□□ -0.3
SLC25A1P53007 AC138466.3-201ENST00000619983 221 ntBASIC13.16□□□□□ -0.3
SLC25A1P53007 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.16□□□□□ -0.3
SLC25A1P53007 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.16□□□□□ -0.3
SLC25A1P53007 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 HSPA8P5-201ENST00000456928 2069 ntBASIC13.16□□□□□ -0.3
SLC25A1P53007 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC25A1P53007 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC25A1P53007 C8orf49-201ENST00000525043 1968 ntBASIC13.15□□□□□ -0.3
SLC25A1P53007 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC25A1P53007 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 CYMP-203ENST00000474680 1263 ntBASIC13.15□□□□□ -0.3
SLC25A1P53007 FTLP10-202ENST00000505798 471 ntBASIC13.15□□□□□ -0.3
SLC25A1P53007 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
SLC25A1P53007 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.15□□□□□ -0.3
SLC25A1P53007 API5-211ENST00000534695 560 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
SLC25A1P53007 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.15□□□□□ -0.3
SLC25A1P53007 AC027796.2-201ENST00000575326 344 ntBASIC13.15□□□□□ -0.3
SLC25A1P53007 RN7SL48P-201ENST00000579283 293 ntBASIC13.15□□□□□ -0.3
SLC25A1P53007 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.15□□□□□ -0.3
SLC25A1P53007 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 ENPP7P14-201ENST00000621765 1040 ntBASIC13.15□□□□□ -0.3
SLC25A1P53007 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SLC25A1P53007 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC25A1P53007 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 CICP16-201ENST00000502609 2813 ntBASIC13.15□□□□□ -0.3
SLC25A1P53007 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
SLC25A1P53007 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC25A1P53007 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SLC25A1P53007 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.15□□□□□ -0.31
SLC25A1P53007 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
SLC25A1P53007 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.15□□□□□ -0.31
SLC25A1P53007 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.15□□□□□ -0.31
SLC25A1P53007 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SLC25A1P53007 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SLC25A1P53007 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SLC25A1P53007 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC25A1P53007 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SLC25A1P53007 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms