Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.56□□□□□ -0.24
CENPAP49450 NUS1P3-201ENST00000423502 862 ntBASIC13.56□□□□□ -0.24
CENPAP49450 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.56□□□□□ -0.24
CENPAP49450 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 TPRX2P-201ENST00000535362 881 ntBASIC13.56□□□□□ -0.24
CENPAP49450 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 AC004840.1-201ENST00000636359 365 ntBASIC13.56□□□□□ -0.24
CENPAP49450 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.55□□□□□ -0.24
CENPAP49450 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.55□□□□□ -0.24
CENPAP49450 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.55□□□□□ -0.24
CENPAP49450 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.55□□□□□ -0.24
CENPAP49450 AC113367.3-201ENST00000508316 1912 ntBASIC13.55□□□□□ -0.24
CENPAP49450 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.55□□□□□ -0.24
CENPAP49450 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
CENPAP49450 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CENPAP49450 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
CENPAP49450 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 SPDYE19P-201ENST00000338590 713 ntBASIC13.55□□□□□ -0.24
CENPAP49450 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.55□□□□□ -0.24
CENPAP49450 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.55□□□□□ -0.24
CENPAP49450 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.55□□□□□ -0.24
CENPAP49450 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.55□□□□□ -0.24
CENPAP49450 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.55□□□□□ -0.24
CENPAP49450 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
CENPAP49450 GAPDHP40-201ENST00000505218 1006 ntBASIC13.55□□□□□ -0.24
CENPAP49450 DOC2GP-202ENST00000514950 1163 ntBASIC13.55□□□□□ -0.24
CENPAP49450 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.55□□□□□ -0.24
CENPAP49450 AL049840.4-201ENST00000602422 811 ntBASIC13.55□□□□□ -0.24
CENPAP49450 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.55□□□□□ -0.24
CENPAP49450 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC13.55□□□□□ -0.24
CENPAP49450 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.55□□□□□ -0.24
CENPAP49450 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CENPAP49450 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.55□□□□□ -0.24
CENPAP49450 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CENPAP49450 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.54□□□□□ -0.24
CENPAP49450 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CENPAP49450 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CENPAP49450 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CENPAP49450 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CENPAP49450 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CENPAP49450 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.54□□□□□ -0.24
CENPAP49450 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CENPAP49450 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CENPAP49450 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CENPAP49450 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.54□□□□□ -0.24
CENPAP49450 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CENPAP49450 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.54□□□□□ -0.24
CENPAP49450 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.54□□□□□ -0.24
CENPAP49450 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.54□□□□□ -0.24
CENPAP49450 RPL13AP25-201ENST00000484130 612 ntBASIC13.54□□□□□ -0.24
CENPAP49450 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.54□□□□□ -0.24
CENPAP49450 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.54□□□□□ -0.24
CENPAP49450 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.54□□□□□ -0.24
CENPAP49450 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.54□□□□□ -0.24
CENPAP49450 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.54□□□□□ -0.24
CENPAP49450 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.54□□□□□ -0.24
CENPAP49450 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CENPAP49450 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
CENPAP49450 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms