Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 DBET-201ENST00000630918 3363 ntBASIC15.67■□□□□ 0.1
BRCC3P46736 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 KRT8P21-201ENST00000430398 1491 ntBASIC15.66■□□□□ 0.1
BRCC3P46736 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCC3P46736 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BRCC3P46736 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
BRCC3P46736 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 AC015688.4-201ENST00000580780 1647 ntBASIC15.66■□□□□ 0.1
BRCC3P46736 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BRCC3P46736 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCC3P46736 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCC3P46736 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCC3P46736 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCC3P46736 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCC3P46736 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.66■□□□□ 0.1
BRCC3P46736 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCC3P46736 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.66■□□□□ 0.1
BRCC3P46736 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCC3P46736 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCC3P46736 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
BRCC3P46736 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BRCC3P46736 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
BRCC3P46736 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.66■□□□□ 0.1
BRCC3P46736 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.66■□□□□ 0.1
BRCC3P46736 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
BRCC3P46736 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
BRCC3P46736 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCC3P46736 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCC3P46736 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.66■□□□□ 0.1
BRCC3P46736 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BRCC3P46736 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.65■□□□□ 0.1
BRCC3P46736 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCC3P46736 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCC3P46736 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BRCC3P46736 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
BRCC3P46736 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BRCC3P46736 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BRCC3P46736 AC007274.2-201ENST00000421675 662 ntBASIC15.65■□□□□ 0.1
BRCC3P46736 AC116345.2-201ENST00000512837 523 ntBASIC15.65■□□□□ 0.1
BRCC3P46736 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 MIR3907-201ENST00000579424 151 ntBASIC15.65■□□□□ 0.1
BRCC3P46736 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCC3P46736 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
BRCC3P46736 AC018629.1-201ENST00000623381 1736 ntBASIC15.65■□□□□ 0.1
BRCC3P46736 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BRCC3P46736 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCC3P46736 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCC3P46736 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms