Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.2□□□□□ -0.46
NKX2-1P43699 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.2□□□□□ -0.46
NKX2-1P43699 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.2□□□□□ -0.46
NKX2-1P43699 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NKX2-1P43699 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 CICP16-201ENST00000502609 2813 ntBASIC12.19□□□□□ -0.46
NKX2-1P43699 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX2-1P43699 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX2-1P43699 AC007967.4-201ENST00000614700 386 ntBASIC12.19□□□□□ -0.46
NKX2-1P43699 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX2-1P43699 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 RN7SL832P-201ENST00000607781 1756 ntBASIC12.19□□□□□ -0.46
NKX2-1P43699 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 MIR497HG-202ENST00000572453 3838 ntBASIC12.19□□□□□ -0.46
NKX2-1P43699 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NKX2-1P43699 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NKX2-1P43699 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-1P43699 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 AC011840.2-201ENST00000563063 1520 ntBASIC12.18□□□□□ -0.46
NKX2-1P43699 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 YBX2P1-201ENST00000394192 760 ntBASIC12.18□□□□□ -0.46
NKX2-1P43699 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.18□□□□□ -0.46
NKX2-1P43699 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-1P43699 MKNK2P1-201ENST00000437526 628 ntBASIC12.18□□□□□ -0.46
NKX2-1P43699 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-1P43699 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-1P43699 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
NKX2-1P43699 POLD2P1-201ENST00000511220 997 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms