Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
COL15A1P39059 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.48■□□□□ 0.55
COL15A1P39059 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COL15A1P39059 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
COL15A1P39059 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.48■□□□□ 0.55
COL15A1P39059 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.48■□□□□ 0.55
COL15A1P39059 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.48■□□□□ 0.55
COL15A1P39059 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.48■□□□□ 0.55
COL15A1P39059 MIR3180-2-201ENST00000581748 88 ntBASIC18.48■□□□□ 0.55
COL15A1P39059 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.48■□□□□ 0.55
COL15A1P39059 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
COL15A1P39059 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL15A1P39059 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COL15A1P39059 AC139712.1-201ENST00000378256 1875 ntBASIC18.48■□□□□ 0.55
COL15A1P39059 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.47■□□□□ 0.55
COL15A1P39059 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
COL15A1P39059 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.47■□□□□ 0.55
COL15A1P39059 IL9RP3-201ENST00000442856 1674 ntBASIC18.47■□□□□ 0.55
COL15A1P39059 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
COL15A1P39059 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.47■□□□□ 0.55
COL15A1P39059 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.47■□□□□ 0.55
COL15A1P39059 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 ST13P19-201ENST00000442505 1124 ntBASIC18.47■□□□□ 0.55
COL15A1P39059 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC18.47■□□□□ 0.55
COL15A1P39059 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.47■□□□□ 0.55
COL15A1P39059 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
COL15A1P39059 AC027237.1-201ENST00000560942 655 ntBASIC18.47■□□□□ 0.55
COL15A1P39059 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.47■□□□□ 0.55
COL15A1P39059 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 AC124068.2-201ENST00000569473 1109 ntBASIC18.47■□□□□ 0.55
COL15A1P39059 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
COL15A1P39059 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.47■□□□□ 0.55
COL15A1P39059 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.47■□□□□ 0.55
COL15A1P39059 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL15A1P39059 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL15A1P39059 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COL15A1P39059 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
COL15A1P39059 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COL15A1P39059 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
COL15A1P39059 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.46■□□□□ 0.55
COL15A1P39059 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.46■□□□□ 0.55
COL15A1P39059 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
COL15A1P39059 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.46■□□□□ 0.55
COL15A1P39059 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.46■□□□□ 0.55
COL15A1P39059 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
COL15A1P39059 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL15A1P39059 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.45■□□□□ 0.54
COL15A1P39059 KRT17P5-201ENST00000332088 839 ntBASIC18.45■□□□□ 0.54
COL15A1P39059 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.45■□□□□ 0.54
COL15A1P39059 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 AL512306.1-201ENST00000432698 848 ntBASIC18.45■□□□□ 0.54
COL15A1P39059 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.45■□□□□ 0.54
COL15A1P39059 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.45■□□□□ 0.54
COL15A1P39059 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL15A1P39059 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.45■□□□□ 0.54
COL15A1P39059 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL15A1P39059 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
COL15A1P39059 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
COL15A1P39059 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms