Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC4P35249 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.33■□□□□ 0.52
RFC4P35249 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC4P35249 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.33■□□□□ 0.52
RFC4P35249 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
RFC4P35249 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.33■□□□□ 0.52
RFC4P35249 SIGLEC22P-201ENST00000599104 714 ntBASIC18.33■□□□□ 0.52
RFC4P35249 AL591471.1-201ENST00000621855 229 ntBASIC18.33■□□□□ 0.52
RFC4P35249 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC4P35249 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC4P35249 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC4P35249 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC4P35249 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC4P35249 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.33■□□□□ 0.52
RFC4P35249 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC4P35249 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC4P35249 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.33■□□□□ 0.52
RFC4P35249 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFC4P35249 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC4P35249 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC4P35249 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC4P35249 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC4P35249 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.32■□□□□ 0.52
RFC4P35249 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 AC006504.5-208ENST00000588784 2401 ntBASIC18.32■□□□□ 0.52
RFC4P35249 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.32■□□□□ 0.52
RFC4P35249 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.32■□□□□ 0.52
RFC4P35249 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RFC4P35249 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 KRT17P4-201ENST00000429445 819 ntBASIC18.32■□□□□ 0.52
RFC4P35249 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.32■□□□□ 0.52
RFC4P35249 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.32■□□□□ 0.52
RFC4P35249 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.32■□□□□ 0.52
RFC4P35249 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.32■□□□□ 0.52
RFC4P35249 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.32■□□□□ 0.52
RFC4P35249 RN7SL665P-201ENST00000578793 300 ntBASIC18.32■□□□□ 0.52
RFC4P35249 AC009145.4-201ENST00000625119 1294 ntBASIC18.32■□□□□ 0.52
RFC4P35249 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.32■□□□□ 0.52
RFC4P35249 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RFC4P35249 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RFC4P35249 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.32■□□□□ 0.52
RFC4P35249 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RFC4P35249 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFC4P35249 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RFC4P35249 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.32■□□□□ 0.52
RFC4P35249 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC4P35249 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RFC4P35249 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC4P35249 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RFC4P35249 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC4P35249 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.31■□□□□ 0.52
RFC4P35249 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.31■□□□□ 0.52
RFC4P35249 OR8T1P-201ENST00000421347 918 ntBASIC18.31■□□□□ 0.52
RFC4P35249 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC4P35249 AC092580.1-201ENST00000433998 658 ntBASIC18.31■□□□□ 0.52
RFC4P35249 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 FAM86B3P-203ENST00000523992 854 ntBASIC18.31■□□□□ 0.52
RFC4P35249 AC012158.2-201ENST00000536546 354 ntBASIC18.31■□□□□ 0.52
RFC4P35249 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC4P35249 AC055811.3-201ENST00000584952 686 ntBASIC18.31■□□□□ 0.52
RFC4P35249 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC4P35249 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC4P35249 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RFC4P35249 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RFC4P35249 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC4P35249 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC4P35249 AL365203.3-201ENST00000609742 2057 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms