Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.64□□□□□ -0.23
SHC1P29353 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SHC1P29353 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SHC1P29353 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.64□□□□□ -0.23
SHC1P29353 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.64□□□□□ -0.23
SHC1P29353 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.64□□□□□ -0.23
SHC1P29353 AL590640.2-201ENST00000457038 527 ntBASIC13.64□□□□□ -0.23
SHC1P29353 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.64□□□□□ -0.23
SHC1P29353 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.64□□□□□ -0.23
SHC1P29353 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.64□□□□□ -0.23
SHC1P29353 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.64□□□□□ -0.23
SHC1P29353 SNX29P1-201ENST00000548357 1007 ntBASIC13.64□□□□□ -0.23
SHC1P29353 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.64□□□□□ -0.23
SHC1P29353 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.64□□□□□ -0.23
SHC1P29353 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 AL512343.1-201ENST00000605837 169 ntBASIC13.64□□□□□ -0.23
SHC1P29353 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 AL162274.1-201ENST00000617191 1098 ntBASIC13.64□□□□□ -0.23
SHC1P29353 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHC1P29353 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.64□□□□□ -0.23
SHC1P29353 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SHC1P29353 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.64□□□□□ -0.23
SHC1P29353 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.64□□□□□ -0.23
SHC1P29353 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHC1P29353 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
SHC1P29353 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SHC1P29353 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.63□□□□□ -0.23
SHC1P29353 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
SHC1P29353 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 ANKRD19P-201ENST00000338192 862 ntBASIC13.63□□□□□ -0.23
SHC1P29353 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.63□□□□□ -0.23
SHC1P29353 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.63□□□□□ -0.23
SHC1P29353 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.63□□□□□ -0.23
SHC1P29353 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.63□□□□□ -0.23
SHC1P29353 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SHC1P29353 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
SHC1P29353 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.63□□□□□ -0.23
SHC1P29353 AC025279.2-201ENST00000569730 653 ntBASIC13.63□□□□□ -0.23
SHC1P29353 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
SHC1P29353 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.63□□□□□ -0.23
SHC1P29353 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SHC1P29353 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 PDIA3P1-201ENST00000471856 1510 ntBASIC13.63□□□□□ -0.23
SHC1P29353 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SHC1P29353 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.63□□□□□ -0.23
SHC1P29353 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.63□□□□□ -0.23
SHC1P29353 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.63□□□□□ -0.23
SHC1P29353 AC023090.2-201ENST00000625182 2110 ntBASIC13.63□□□□□ -0.23
SHC1P29353 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHC1P29353 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SHC1P29353 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.63□□□□□ -0.23
SHC1P29353 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SHC1P29353 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.62□□□□□ -0.23
SHC1P29353 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SHC1P29353 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHC1P29353 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms